| Protein: | MMP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 583 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MMP1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..583] | [1..583] |
|
|
0.0 | [18..583] | [17..582] |
|
|
0.0 | [1..582] | [22..608] |
|
Region A: Residues: [1-583] |
1 11 21 31 41 51
| | | | | |
1 MDEFESTKLS KVQFSTSVLS TPSNEGNNLI HRFKNSFKRN DSPAIQEGLL YSELSEEEKI 60
61 QWDLANQPYK KVLDQRHLTM IAIGGTLGTG LFIGLGESLA SGPASLLIGF LLVGASMLCV 120
121 VQCGAELSCQ YPVSGSYALH ASRFIDPSVG FSIGINYLLM WLISYPSELV GCSLTISYWA 180
181 PSVNPAAWVA IAFVLSMLLN LFGARGFAES EFYMSIFKIV ALFIFIIIGI VLIAGGGPDS 240
241 TGYIGTKYWH DPGSFAVPVF KNLCNTFVSA AYSFSGTEMV VLTSTEARSV SSVSRAAKGT 300
301 FWRIIIFYIV TVIIIGCLVP YNDPRLISGS SSEDITASPF VIALSNTGAM GTRVSHFMNA 360
361 VILIAVFSVC NSCVYASSRL IQGLATAGQL PKICAYMDRN GRPLVGMAIC GAFGLLGFLV 420
421 VSKNQGTVFT WLFALCSISF FTTWFCICFC QVRFRMAMKA QGRSKDDIIY RSTLGIYGGI 480
481 FGCILNVLLV IGEIYVSAAP VGSPSSAANF FEYCMSIPIM IAVYIGHRIY RRDWRHWYIK 540
541 RMDIDLDSGH SLEDFEATKL ERDEDKKYVS SKPLYYRIYR FFC
|
| Detection Method: |  |
| Confidence: | 161.154902 |
| Match: | PF00324 |
| Description: | Amino acid permease |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
