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View Structure Prediction Details

Protein: MEH1
Organism: Saccharomyces cerevisiae
Length: 184 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MEH1.

Description E-value Query
Range
Subject
Range
gi|49528179, gi|... - gi|50292867|ref|XP_448866.1| unnamed protein product [Candida glabrata], gi|49528179|emb|CAG61836.1|...
gi|49528179 - gi|49528179|emb|CAG61836.1| unnamed protein product [Candida glabrata]
106.0 [0..1] [182..1]
gi|49640259 - gi|49640259|emb|CAH02716.1| KLLA0A02937p [Kluyveromyces lactis]
gi|49640259, gi|... - gi|50302387|ref|XP_451128.1| unnamed protein product [Kluyveromyces lactis], gi|49640259|emb|CAH0271...
86.0 [0..1] [99..1]
gi|44983212, gi|... - gi|45190316|ref|NP_984570.1| AEL290Cp [Ashbya gossypii ATCC 10895], gi|44983212|gb|AAS52394.1| AEL29...
gi|44983212 - gi|44983212|gb|AAS52394.1| AEL290Cp [Ashbya gossypii ATCC 10895]
78.0 [0..1] [91..39]

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Predicted Domain #1
Region A:
Residues: [1-184]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAVLSCCRN HSGEENEALL REQQAGYGSQ GNANDEYDAE QMRLKEHEHE QKLLAREQEL  60
   61 RDIVANTNDK LIDISMINNS GIVIQGTDLQ EALDKRQQEE GGDSREDERS AGDDNLSGHS 120
  121 VPSSGSAQAT THQTAPRTNT FTLLTSPDSA KISKEQLKKL HSNILNEIFS QSQVNKPGPL 180
  181 TVPF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.284 a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.280 d.129.3 Bet v1-like
View Download 0.275 d.58.26 GHMP Kinase, C-terminal domain
View Download 0.275 d.58.26 GHMP Kinase, C-terminal domain
View Download 0.237 d.185.1 LuxS/MPP-like metallohydrolase
View Download 0.237 d.185.1 LuxS/MPP-like metallohydrolase
View Download 0.225 d.185.1 LuxS/MPP-like metallohydrolase
View Download 0.225 d.185.1 LuxS/MPP-like metallohydrolase
View Download 0.205 d.95.2 Homing endonucleases


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle