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View Structure Prediction Details

Protein: YKL223W
Organism: Saccharomyces cerevisiae
Length: 110 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YKL223W.

Description E-value Query
Range
Subject
Range
YIW0_YEAST - Putative UPF0377 protein YIR040C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIR040C...
YIR040C - [DUBIOUS] Dubious open reading frame unlikely to encode a protein, based on experimental and compara...
181.0 [0..1] [110..1]

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Predicted Domain #1
Region A:
Residues: [1-110]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMLLFLNES YIFHRLRMWS TVLWHSCVFV CVECENANYR VPRCLIKPFS VPVTFPFSVK  60
   61 KNIRILDLDP RTEAYCLSPY SVCSKRLPCK KYFYLLNSYN IKRVLGVVYC 

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Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.239 c.58.1 Aminoacid dehydrogenase-like, N-terminal domain
View Download 0.231 c.23.1 CheY-like
View Download 0.222 c.58.1 Aminoacid dehydrogenase-like, N-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle