YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CBT1
Organism: Saccharomyces cerevisiae
Length: 271 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CBT1.

Description E-value Query
Range
Subject
Range
CBT1 - Protein involved in 5' end processing of mitochondrial COB, 15S_rRNA, and RPM1 transcripts; may also...
CBT1_YEAST - Cytochrome b termination protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CBT1 ...
0.0 [1..271] [1..271]

Back

Predicted Domain #1
Region A:
Residues: [1-271]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSYGSHSSE VSKVLKTPKF VLRYGNVSSK QRFALKRKIN YKLRESKYQE YLNEYNTFVL  60
   61 YDWENSGAGS LVDSSYNLPS LWKEFITEGI SKGAINDKLP TVFMKRKLTN SALGHCLGLD 120
  121 FLTDPSESEH EYRCMFQTVQ DIPSLSQLIL FNSMPNVPVR LKLHTIGINI NFGCKRSLIS 180
  181 NGGDQDTEMS EAVSYIQPLL EESSRMYRNL NYWKLLKIAR NNKKDEPLDQ STRIKSQVKL 240
  241 LLSQLATNRI TSPSVTDHGG HNWLIFTRRR L

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle