YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: MIA40
Organism: Saccharomyces cerevisiae
Length: 427 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MIA40.

Description E-value Query
Range
Subject
Range
gi|8163674 - gi|8163674|gb|AAF73795.1|AF154026_1 surface protein PspC [Streptococcus pneumoniae]
1.0E-52 [63..426] [4..371]

Back

Predicted Domain #1
Region A:
Residues: [1-427]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKLWNTNYQ LEVGSIQRVY IISKMLRNLV VRNACRNRPS IQVARGLCRH QTRRLMASSP  60
   61 QFGRNSNQEK TAGFIMGILS MAGALYFIAP NRKPLFASRK VESDKTAEEE LSSGGEQSPE 120
  121 NEDDNNSKSD ENGDDNDSKN DETEAGPQLG GDKIGASKVA EDGELVVLAE EDNKSSEDKD 180
  181 TDESKVSTKD DEQSNEDNAT ANNQKDENIS SENSEENTSD KTLDNNAGSS EKKDPEHSDD 240
  241 EKSQQGQSDD KTTTEDNNGE EESSKKTVSD SENSAKQSES SDEEKEELRK QEEKQMGPTE 300
  301 EEVQHEGAYN PDTGEINWDC PCLGGMAHGP CGEEFKSAFS CFVYSEAEPK GIDCVEKFQH 360
  361 MQDCFRKYPE HYAEQLKETS DDEEPQDKVK VNTIESAPNV SSAKENAAKK AEQSDVKKEP 420
  421 LNEESKP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle