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View Structure Prediction Details

Protein: MRP8
Organism: Saccharomyces cerevisiae
Length: 219 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRP8.

Description E-value Query
Range
Subject
Range
gi|151941665 - gi|151941665|gb|EDN60027.1| mitochondrial ribosomal protein [Saccharomyces cerevisiae YJM789]
MRP8_YEAST - Uncharacterized protein MRP8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRP8 PE=1 S...
gi|190409696 - gi|190409696|gb|EDV12961.1| mitochondrial 40S ribosomal protein MRP8 [Saccharomyces cerevisiae RM11-...
MRP8 - Protein of unknown function; undergoes sumoylation; transcription induced under cell wall stress; pr...
0.0 [1..219] [1..219]

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Predicted Domain #1
Region A:
Residues: [1-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNEIELLQK QVSELQDLVK KQSLIISKTG ERVLELQLDK QKHDVTDFDS KFSKSISKKS  60
   61 GSATQFDATD FATNEDLVEL VKELQGELNF IEERSIRRLV NSLKKDDDDV IAPLPNADGD 120
  121 IPAISDGVFP KSLKEFKDIP DLKLVRLAKF YERLPPTLKE QEDFENFLEG KVEAFHINET 180
  181 TDEEISKELE KFSKDELDDA FNDVARYLGL SLRRGTEIW

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle