Protein: | RRN3 |
Organism: | Saccharomyces cerevisiae |
Length: | 627 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RRN3.
Description | E-value | Query Range |
Subject Range |
|
640.0 | [0..55] | [619..55] |
|
638.0 | [0..55] | [619..55] |
|
613.0 | [0..55] | [619..55] |
|
607.0 | [0..55] | [619..55] |
|
599.0 | [0..47] | [627..21] |
|
598.0 | [0..88] | [619..28] |
|
583.0 | [0..55] | [619..53] |
Region A: Residues: [1-272] |
1 11 21 31 41 51 | | | | | | 1 MMAFENTSKR PPQDFVAPID QKKRKVQFSD STGLVTLQPE EIKDEVFSAA MYSRFVKSAL 60 61 DDLDKNDSTQ IGIIANQVAL PSKNPERIND KNLNILLDIL SSNINRIESS RGTFLIQSII 120 121 NFEKWWELPP HTLSKYIYFI KILCSSIPKW WQDVSMILVS CFILPIKQTV CHHDMLKYFL 180 181 RMIPSSMGFI DTYLAKFFPN KNDTRRKLVN YTSNLLKLRG YCSELGFQIW SLLIEKIISI 240 241 DVELQNELDE LDDDVDDDDL EEVDLEDDDD LD |
Region A: Residues: [273-504] |
1 11 21 31 41 51 | | | | | | 1 DDSGDDDDEN CGNSNEELRS GAADGSQSDS EDMDIIEGMD GTEEYNVELT QGIKELSTKL 60 61 DSILTLVSTH VEEQVTPESL ESGEGVGVFN TLTTLFKTHV LPTYYTRSIQ YIMFHVSQQQ 120 121 LELMDSFLVT LIDISFAVNE AAEKKIKSLQ YLGSYIARAK KLSRTQIIFV ASYLTSWLNR 180 181 YVIEREEEVD QRGGMERFKH FYAAFQALCY IFCFRHNIFR DTDGNWECEL DK |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [505-627] |
1 11 21 31 41 51 | | | | | | 1 FFQRMVISKF NPLKFCNENV MLMFARIAQQ ESVAYCFSII ENNNNERLRG IIGKADSDKK 60 61 ENSAQANTTS SSWSLATRQQ FIDLQSYFPY DPLFLKNYKI LMKEYYIEWS EASGEYESDG 120 121 SDD |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.626 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.548 | N/A | N/A | d.54.1 | Enolase N-terminal domain-like |
View | Download | 0.537 | N/A | N/A | a.47.2 | t-snare proteins |
View | Download | 0.537 | N/A | N/A | a.47.2 | t-snare proteins |
View | Download | 0.499 | N/A | N/A | d.92.2 | beta-N-acetylhexosaminidase-like domain |
View | Download | 0.495 | N/A | N/A | a.287.1 | Description not found. |
View | Download | 0.467 | N/A | N/A | d.54.1 | Enolase N-terminal domain-like |
View | Download | 0.423 | N/A | N/A | d.109.1 | Actin depolymerizing proteins |
View | Download | 0.415 | N/A | N/A | d.109.1 | Actin depolymerizing proteins |