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View Structure Prediction Details

Protein: SRP21
Organism: Saccharomyces cerevisiae
Length: 167 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SRP21.

Description E-value Query
Range
Subject
Range
gi|151941683 - gi|151941683|gb|EDN60045.1| signal recognition particle component [Saccharomyces cerevisiae YJM789]
SRP21 - Subunit of the signal recognition particle (SRP), which functions in protein targeting to the endopl...
SRP21_YEAST - Signal recognition particle subunit SRP21 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) G...
5.0E-64 [1..154] [1..154]

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Predicted Domain #1
Region A:
Residues: [1-167]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVKPIDNYI TNSVRLFEVN PSQTLFSISY KPPTQKTDTK VSFRTHNSHL SLNYKFTTNK  60
   61 SKDVSRLLSA LGPRGVSITP GKIEKIAQSK KKNNKIKESS KKIKGKSIQD IVGLATLIVN 120
  121 TDVEKSDPAA KKTATEPKQK ANAVQNNNGN SAASKKKKNK NKGKKKR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle