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View Structure Prediction Details

Protein: VPH2
Organism: Saccharomyces cerevisiae
Length: 215 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VPH2.

Description E-value Query
Range
Subject
Range
VPH2 - Integral membrane protein required for vacuolar H+-ATPase (V-ATPase) function, although not an actua...
VPH2_YEAST - Vacuolar ATPase assembly integral membrane protein VPH2 OS=Saccharomyces cerevisiae (strain ATCC 204...
2.0E-89 [1..215] [1..215]
VPH2_SCHPO - Vacuolar ATPase assembly integral membrane protein vph2 OS=Schizosaccharomyces pombe (strain 972 / A...
vph2 - endoplasmic reticulum membrane involved in assembly of the V-ATPase
8.0E-36 [99..190] [50..138]

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Predicted Domain #1
Region A:
Residues: [1-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFEIKLNDRI TEFLRKFKNS AKSNEGIDED IDLFLKRHAI PMQSLLFYVK EYRKDSDLQC  60
   61 SIKELLKPLE FEFKPKAVRG LHYSEDFKKK LEFLKYQEQE LEYQSMVKRS KSVFSLQEDD 120
  121 ELTPSQINKQ IKEQVTTVFN VLVSVISVVV AIWYWTGSST NFPVHVRLLL CLFFGILVLV 180
  181 ADVVVYNSYL KKLEEAKVKE KTKVEKKKVL SKITL

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Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle