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View Structure Prediction Details

Protein: CWP1
Organism: Saccharomyces cerevisiae
Length: 239 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CWP1.

Description E-value Query
Range
Subject
Range
CWP1_YEAST - Cell wall protein CWP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CWP1 PE=1 SV=2
gi|151941707 - gi|151941707|gb|EDN60069.1| cell wall mannoprotein [Saccharomyces cerevisiae YJM789]
CWP1 - Cell wall mannoprotein that localizes specifically to birth scars of daughter cells, linked to a bet...
3.0E-74 [1..224] [1..224]

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Predicted Domain #1
Region A:
Residues: [1-239]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFSTALSVA LFALAKMVIA DSEEFGLVSI RSGSDLQYLS VYSDNGTLKL GSGSGSFEAT  60
   61 ITDDGKLKFD DDKYAVVNED GSFKEGSESD AATGFSIKDG HLNYKSSSGF YAIKDGSSYI 120
  121 FSSKQSDDAT GVAIRPTSKS GSVAADFSPS DSSSSSSASA SSASASSSTK HSSSIESVET 180
  181 STTVETSSAS SPTASVISQI TDGQIQAPNT VYEQTENAGA KAAVGMGAGA LAVAAAYLL

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle