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View Structure Prediction Details

Protein: YKL053W
Organism: Saccharomyces cerevisiae
Length: 124 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YKL053W.

Predicted Domain #1
Region A:
Residues: [1-124]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWLSLYRRKN IAGPLPCVLI FITSKNCMYL FILSIRRKMN DGPRLWYFFR TLFFIGPFVV  60
   61 IIRLSLRVVV PLLQRRALYI IAVLIVVIAV VINMFFMSQL LPHFIGHNRR RYHAGTRPVL 120
  121 LLQK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.841 a.216.1 Description not found.
View Download 0.830 a.24.9 alpha-catenin/vinculin
View Download 0.811 a.216.1 Description not found.
View Download 0.794 a.216.1 Description not found.
View Download 0.752 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.752 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.738 a.19.1 Fertilization protein
View Download 0.718 a.79.1 Antitermination factor NusB
View Download 0.707 a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle