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View Structure Prediction Details

Protein: YKL044W
Organism: Saccharomyces cerevisiae
Length: 106 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YKL044W.

Predicted Domain #1
Region A:
Residues: [1-106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYVIMTFSS ARMSERRARI IYIWMHLSAY KINFPFVQFP TFFSLFRLQK KAAILIKNPS  60
   61 PFFLFFLFPY RKNSTARTIH QINQAVALVL LCVSHHLTYL PSVPSL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.698 d.129.6 Description not found.
View Download 0.656 a.47.2 t-snare proteins
View Download 0.656 a.47.2 t-snare proteins
View Download 0.653 d.58.20 NAD-binding domain of HMG-CoA reductase
View Download 0.637 d.58.14 Ribosomal protein S6
View Download 0.637 d.58.14 Ribosomal protein S6
View Download 0.626 a.7.1 Spectrin repeat
View Download 0.609 d.52.7 Ribosome-binding factor A, RbfA
View Download 0.600 d.204.1 Ribosome binding protein Y (YfiA homologue)
View Download 0.558 d.58.44 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle