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View Structure Prediction Details

Protein: YKL036C
Organism: Saccharomyces cerevisiae
Length: 130 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YKL036C.

Predicted Domain #1
Region A:
Residues: [1-130]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCFGVLLSGH YYVMVHLLWK LYYIIGRGLG LLTLLMWKEP EIESPTPKTV TSISWYLLEE  60
   61 LCCLFRFIYS IQNRERKCKN GPSPNKRGSA SGCSRRGGGR GSGYKTLYRD LCENKPTPEL 120
  121 WTLQAPELNL 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.545 a.19.1 Fertilization protein
View Download 0.503 a.47.2 t-snare proteins
View Download 0.445 a.47.2 t-snare proteins
View Download 0.367 a.7.7 BAG domain
View Download 0.349 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle