| Protein: | PAN3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 679 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PAN3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..679] | [1..679] |
|
|
0.0 | [149..672] | [7..521] |
|
|
0.0 | [129..672] | [8..554] |
|
|
0.0 | [192..672] | [17..485] |
|
|
0.0 | [192..672] | [17..482] |
|
|
0.0 | [192..672] | [17..485] |
|
|
0.0 | [234..675] | [12..444] |
|
Region A: Residues: [1-224] |
1 11 21 31 41 51
| | | | | |
1 MDKINPDWAK DIPCRNITIY GYCKKEKEGC PFKHSDNTTA TTINDVPPPI DVGEATTPTM 60
61 TSVPKFNAKV SASFTPMTVG SDSLTTVTNT TSAATNATGN IAMAATSATA STVNPMINPI 120
121 VNSSLVNNNN NNSNISISIP TTASSSNYDP FNAPIFTPSS TSSIHTNANA HSFPFPSIAN 180
181 SGGININATD DNSNNMSMAN NVPPPMQPPP IESSNLKYPR IYPP
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [225-382] |
1 11 21 31 41 51
| | | | | |
1 PHSLLQYHLY APEQPSSLKS LLKPNERSAD QLFIPNNIRE DLTKKNLSIL QVFPSSGKVI 60
61 PSIVQDYFNL VPLNFNNNDF LNKTTLFKVF SNYDGKAYVL KRLPNIDKSM NPNKISKIYQ 120
121 IWSKINCTNL IKFRDIFQTT KFGDLSICLV FDYYPNSL
|
|
Region B: Residues: [567-585] |
1 11 21 31 41 51
| | | | | |
1 SVLSRELENG RLFRLVNKL
|
| Detection Method: | |
| Confidence: | 82.221849 |
| Match: | 1a06__ |
| Description: | Calmodulin-dependent protein kinase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [383-566] |
1 11 21 31 41 51
| | | | | |
1 SLYDYHFVNF PKFPITNNYL WIYLVQLTNV INSIHSQNLS IGNTLNWRKV LITGDPGRIK 60
61 LSHCNFMDLL FNDDTDTVVS SGGSTIEGQQ QLDYKYLGEL LFNLSINIEN SNNNTAPKEY 120
121 RLEEITPQSI DDMRQIDDKF KDVLKYLISD NGDSKKSIHD LTSHFYDKMF MVLESSQTYT 180
181 EYME
|
| Detection Method: | |
| Confidence: | 82.221849 |
| Match: | 1a06__ |
| Description: | Calmodulin-dependent protein kinase |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [586-679] |
1 11 21 31 41 51
| | | | | |
1 NCIFGRIESR IDINWSESGT KFPIILFYDY VFHQVDSNGK PIMDLTHVLR CLNKLDAGIQ 60
61 EKLMLVTPDE LNCIIISYKE LKDLIESTFR SITQ
|
| Detection Method: | |
| Confidence: | 5.30103 |
| Match: | 1dtlA_ |
| Description: | Troponin C |
Matching Structure (courtesy of the PDB): |
|
