YRC Public Data Repository - Protein Structure Prediction

Protein:	MRP17
Organism:	Saccharomyces cerevisiae
Length:	131 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRP17.

Description	E-value	Query Range	Subject Range
RS6_HAEIN - 30S ribosomal protein S6 OS=Haemophilus influenzae GN=rpsF PE=3 SV=1 gi\|145638543, gi... - gi\|145638543\|ref\|ZP_01794152.1\| 30S ribosomal protein S6 [Haemophilus influenzae PittII], gi\|1452721... gi\|145269358, gi... - gi\|145637412\|ref\|ZP_01793071.1\| 30S ribosomal protein S6 [Haemophilus influenzae PittHH], gi\|1452693... gi\|145267378, gi... - gi\|145635372\|ref\|ZP_01791074.1\| 30S ribosomal protein S6 [Haemophilus influenzae PittAA], gi\|1452673... gi\|144985870, gi... - gi\|145633501\|ref\|ZP_01789230.1\| 30S ribosomal protein S6 [Haemophilus influenzae 3655], gi\|144985870... gi\|145275106, gi... - gi\|145640520\|ref\|ZP_01796104.1\| 30S ribosomal protein S6 [Haemophilus influenzae R3021], gi\|14563027... gi\|145628928, gi... - gi\|145628928\|ref\|ZP_01784728.1\| 30S ribosomal protein S6 [Haemophilus influenzae 22.1-21], gi\|144979... gi\|42629995 - gi\|42629995\|ref\|ZP_00155540.1\| COG0360: Ribosomal protein S6 [Haemophilus influenzae R2846] gi\|53733320 - gi\|53733320\|ref\|ZP_00156367.2\| COG0360: Ribosomal protein S6 [Haemophilus influenzae R2866] RS6_HAEIN - 30S ribosomal protein S6 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=rp... gi\|229812543, gi... - gi\|229844294\|ref\|ZP_04464434.1\| 30S ribosomal protein S6 [Haemophilus influenzae 6P18H1], gi\|2298125... RS6_HAEIG - 30S ribosomal protein S6 OS=Haemophilus influenzae (strain PittGG) GN=rpsF PE=3 SV=1 gi\|229846630, gi... - gi\|229846630\|ref\|ZP_04466738.1\| 30S ribosomal protein S6 [Haemophilus influenzae 7P49H1], gi\|2298107... gi\|145640520, gi... - gi\|145640520\|ref\|ZP_01796104.1\| 30S ribosomal protein S6 [Haemophilus influenzae R3021], gi\|14498400... RS6_HAEI8 - 30S ribosomal protein S6 OS=Haemophilus influenzae (strain 86-028NP) GN=rpsF PE=3 SV=1	4.0E-30	[2..129]	[3..121]
RS6_PASMU - 30S ribosomal protein S6 OS=Pasteurella multocida GN=rpsF PE=3 SV=1 RS6_PASMU - 30S ribosomal protein S6 OS=Pasteurella multocida (strain Pm70) GN=rpsF PE=3 SV=1	4.0E-29	[2..129]	[3..121]
gi\|166961388, gi... - gi\|167420582\|ref\|ZP_02312335.1\| ribosomal protein S6 [Yersinia pestis biovar Orientalis str. MG05-10... gi\|229695559, gi... - gi\|229839193\|ref\|ZP_04459352.1\| 30S ribosomal subunit protein S6 [Yersinia pestis biovar Orientalis ... gi\|167423107, gi... - gi\|167423107\|ref\|ZP_02314860.1\| ribosomal protein S6 [Yersinia pestis biovar Mediaevalis str. K19730... gi\|229836649, gi... - gi\|229836649\|ref\|ZP_04456815.1\| 30S ribosomal subunit protein S6 [Yersinia pestis Pestoides A], gi\|2... RS6_YERPY - 30S ribosomal protein S6 OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=rpsF PE=3 SV=... RS6_YERPB - 30S ribosomal protein S6 OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=rpsF PE=3 SV=1 gi\|165919840, gi... - gi\|165928153\|ref\|ZP_02223985.1\| ribosomal protein S6 [Yersinia pestis biovar Orientalis str. F199101... gi\|165989687, gi... - gi\|166011303\|ref\|ZP_02232201.1\| ribosomal protein S6 [Yersinia pestis biovar Antiqua str. E1979001],... gi\|166214044, gi... - gi\|166214044\|ref\|ZP_02240079.1\| ribosomal protein S6 [Yersinia pestis biovar Antiqua str. B42003004]... gi\|167049370, gi... - gi\|167401345\|ref\|ZP_02306845.1\| ribosomal protein S6 [Yersinia pestis biovar Antiqua str. UG05-0454]... RS6_YERE8 - 30S ribosomal protein S6 OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8... gi\|165937530, gi... - gi\|89102329\|ref\|ZP_01174971.1\| COG0360: Ribosomal protein S6 [Yersinia pestis biovar Orientalis str.... RS6_YERPA - 30S ribosomal protein S6 OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=rpsF PE=3 SV=1 RS6_YERPN - 30S ribosomal protein S6 OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=rpsF PE=3 SV=1 gi\|149288953, gi... - gi\|153997316\|ref\|ZP_02022416.1\| 30S ribosomal protein S6 [Yersinia pestis CA88-4125], gi\|149288953\|g... gi\|45435253, gi\|... - gi\|45440396\|ref\|NP_991935.1\| 30S ribosomal protein S6 [Yersinia pestis biovar Microtus str. 91001], ... gi\|22124559, gi\|... - gi\|22124559\|ref\|NP_667982.1\| 30S ribosomal protein S6 [Yersinia pestis KIM], gi\|21957359\|gb\|AAM84233... gi\|15981463, gi\|... - gi\|218930553\|ref\|YP_002348428.1\| 30S ribosomal protein S6 [Yersinia pestis CO92], gi\|16123685\|ref\|NP... RS6_YERPS - 30S ribosomal protein S6 OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=rpsF PE=3 SV=... gi\|77961292 - gi\|77961292\|ref\|ZP_00825133.1\| COG0360: Ribosomal protein S6 [Yersinia mollaretii ATCC 43969] RS6_YERPS - 30S ribosomal protein S6 OS=Yersinia pseudotuberculosis GN=rpsF PE=3 SV=1 gi\|77958749 - gi\|77958749\|ref\|ZP_00822777.1\| COG0360: Ribosomal protein S6 [Yersinia bercovieri ATCC 43970] RS6_YERPG - 30S ribosomal protein S6 OS=Yersinia pestis bv. Antiqua (strain Angola) GN=rpsF PE=3 SV=1 RS6_YERP3 - 30S ribosomal protein S6 OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=rpsF PE=3... RS6_YERPE - 30S ribosomal protein S6 OS=Yersinia pestis GN=rpsF PE=3 SV=1 gi\|77973976 - gi\|77973976\|ref\|ZP_00829519.1\| COG0360: Ribosomal protein S6 [Yersinia frederiksenii ATCC 33641] gi\|77977622 - gi\|77977622\|ref\|ZP_00833066.1\| COG0360: Ribosomal protein S6 [Yersinia intermedia ATCC 29909] gi\|229899757, gi... - gi\|229899757\|ref\|ZP_04514898.1\| 30S ribosomal subunit protein S6 [Yersinia pestis biovar Orientalis ...	2.0E-28	[2..130]	[3..125]
RS6_RHILO - 30S ribosomal protein S6 OS=Rhizobium loti GN=rpsF PE=3 SV=1 RS6_RHILO - 30S ribosomal protein S6 OS=Rhizobium loti (strain MAFF303099) GN=rpsF PE=3 SV=1	4.0E-28	[2..119]	[3..111]
EG10905 - 30S ribosomal subunit protein S6 / 30S ribosomal subunit protein S6; suppressor of dnaG-Ts RS6_ECOLI - 30S ribosomal protein S6 [Contains: 30S ribosomal protein S6, fully modified isoform; 30S ribosomal ... EG10905 - 30S ribosomal subunit protein S6 / 30S ribosomal subunit protein S6; suppressor of dnaG-Ts	6.0E-28	[2..130]	[3..126]
gi\|190409820 - gi\|190409820\|gb\|EDV13085.1\| ribosomal protein MRP17 [Saccharomyces cerevisiae RM11-1a] MRP17 - Mitochondrial ribosomal protein of the small subunit; MRP17 exhibits genetic interactions with PET12... RT06_YEAST - 37S ribosomal protein MRP17, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ...	1.0E-27	[1..131]	[1..131]
RS6_SHIFL - 30S ribosomal protein S6 OS=Shigella flexneri GN=rpsF PE=3 SV=1 gi\|209750010, gi... - pir\|\|R3EC6 ribosomal protein S6 [validated] - Escherichia coli (strain K-12), gi\|537041\|gb\|AAA97096... gi\|24054885, gi\|... - gi\|24115554\|ref\|NP_710064.1\| 30S ribosomal protein S6 [Shigella flexneri 2a str. 301], gi\|24054885\|g... RS6_ECOL6 - 30S ribosomal protein S6 OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=rpsF PE=3... gi\|30065571, gi\|... - gi\|30065571\|ref\|NP_839742.1\| 30S ribosomal protein S6 [Shigella flexneri 2a str. 2457T], gi\|30043835... RS6_ECO57 - 30S ribosomal protein S6 OS=Escherichia coli O157:H7 GN=rpsF PE=3 SV=1 gi\|16132022, gi\|... - gi\|1790644\|gb\|AAC77157.1\| 30S ribosomal subunit protein S6 [Escherichia coli K12], gi\|16132022\|ref\|N... gi\|15804789, gi\|... - gi\|15804789\|ref\|NP_290830.1\| 30S ribosomal protein S6 [Escherichia coli O157:H7 EDL933], gi\|12519191... RS6_ECOK1 - 30S ribosomal protein S6 OS=Escherichia coli O1:K1 / APEC GN=rpsF PE=3 SV=1 RS6_ECODH - 30S ribosomal protein S6 OS=Escherichia coli (strain K12 / DH10B) GN=rpsF PE=3 SV=1 gi\|124500701, gi... - gi\|124528259\|ref\|ZP_01699583.1\| ribosomal protein S6 [Escherichia coli B], gi\|124500701\|gb\|EAY48171.... RS6_ECOSM - 30S ribosomal protein S6 OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=rpsF PE=3 SV=1 gi\|170766562, gi... - gi\|170766562\|ref\|ZP_02901015.1\| ribosomal protein S6 [Escherichia albertii TW07627], gi\|170124000\|gb... gi\|194434603, gi... - gi\|194434603\|ref\|ZP_03066860.1\| ribosomal protein S6 [Shigella dysenteriae 1012], gi\|194417188\|gb\|ED... gi\|195935990 - gi\|195935990\|ref\|ZP_03081372.1\| 30S ribosomal protein S6 [Escherichia coli O157:H7 str. EC4024] gi\|208729238, gi... - gi\|208809437\|ref\|ZP_03251774.1\| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4206], gi\|2087... gi\|208812869, gi... - gi\|208812869\|ref\|ZP_03254198.1\| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4045], gi\|2087... gi\|208738863, gi... - gi\|208818740\|ref\|ZP_03259060.1\| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4042], gi\|2087... gi\|168751448, gi... - gi\|188014482\|gb\|EDU52604.1\| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4113], gi\|16875144... gi\|189357892, gi... - gi\|189357892\|gb\|EDU76311.1\| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4401], gi\|16875477... gi\|168760443, gi... - gi\|189368955\|gb\|EDU87371.1\| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4501], gi\|16876044... gi\|168766480, gi... - gi\|189363927\|gb\|EDU82346.1\| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4486], gi\|16876648... gi\|187770274, gi... - gi\|187770274\|gb\|EDU34118.1\| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4196], gi\|16877408... gi\|168780633, gi... - gi\|189001825\|gb\|EDU70811.1\| ribosomal protein S6 [Escherichia coli O157:H7 str. EC4076], gi\|16878063... gi\|168784838, gi... - gi\|189375098\|gb\|EDU93514.1\| ribosomal protein S6 [Escherichia coli O157:H7 str. EC869], gi\|168784838... gi\|168801856, gi... - gi\|189376062\|gb\|EDU94478.1\| ribosomal protein S6 [Escherichia coli O157:H7 str. EC508], gi\|168801856... RS6_ECO55 - 30S ribosomal protein S6 OS=Escherichia coli (strain 55989 / EAEC) GN=rpsF PE=3 SV=1 RS6_ECO7I - 30S ribosomal protein S6 OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=rpsF PE=3 SV=1 gi\|296044035\|ref... - 30S ribosomal subunit protein S6 [Escherichia coli], 30S ribosomal subunit protein S6 [Escherichia c... gi\|75242410, gi\|... - gi\|75242410\|ref\|ZP_00726172.1\| COG0360: Ribosomal protein S6 [Escherichia coli F11], gi\|191170756\|re... RS6_ECO5E - 30S ribosomal protein S6 OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=rpsF PE=3 SV=1 gi\|192926347, gi... - gi\|75255927\|ref\|ZP_00727659.1\| COG0360: Ribosomal protein S6 [Escherichia coli E22], gi\|193066024\|re... RS6_ECOSE - 30S ribosomal protein S6 OS=Escherichia coli (strain SE11) GN=rpsF PE=3 SV=1 gi\|191165624, gi... - gi\|75231207\|ref\|ZP_00717614.1\| COG0360: Ribosomal protein S6 [Escherichia coli B7A], gi\|191165624\|re... RS6_ECO27 - 30S ribosomal protein S6 OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=rpsF PE=3 SV=1 gi\|193070872, gi... - gi\|75234251\|ref\|ZP_00718639.1\| COG0360: Ribosomal protein S6 [Escherichia coli E110019], gi\|19307087... gi\|217320686, gi... - gi\|217324465\|ref\|ZP_03440549.1\| ribosomal protein S6 [Escherichia coli O157:H7 str. TW14588], gi\|217... RS6_SHIBS - 30S ribosomal protein S6 OS=Shigella boydii serotype 4 (strain Sb227) GN=rpsF PE=3 SV=1 RS6_ESCF3 - 30S ribosomal protein S6 OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=... gi\|89110920, gi\|... - gi\|89110920\|ref\|AP_004700.1\| 30S ribosomal subunit protein S6 [Escherichia coli str. K-12 substr. W3... RS6_ECO8A - 30S ribosomal protein S6 OS=Escherichia coli O8 (strain IAI1) GN=rpsF PE=3 SV=1 RS6_SHISS - 30S ribosomal protein S6 OS=Shigella sonnei (strain Ss046) GN=rpsF PE=3 SV=1 RS6_ECO45 - 30S ribosomal protein S6 OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=rpsF PE=3 SV=1 RS6_SHIDS - 30S ribosomal protein S6 OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=rpsF PE=3 SV=1 RS6_ECO81 - 30S ribosomal protein S6 OS=Escherichia coli O81 (strain ED1a) GN=rpsF PE=3 SV=1 RS6_ECOHS - 30S ribosomal protein S6 OS=Escherichia coli O9:H4 (strain HS) GN=rpsF PE=3 SV=1 gi\|194415285, gi... - gi\|75212248\|ref\|ZP_00712288.1\| COG0360: Ribosomal protein S6 [Escherichia coli B171], gi\|194426546\|r... RS6_SHIB3 - 30S ribosomal protein S6 OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=rpsF PE=3 SV... RS6_ECO24 - 30S ribosomal protein S6 OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=rpsF PE=3 SV=1 sp\|B7UQK9\|RS6_ECO27 - 30S ribosomal protein S6 OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=rpsF PE=3 SV=1 RS6_ECOUT - 30S ribosomal protein S6 OS=Escherichia coli (strain UTI89 / UPEC) GN=rpsF PE=3 SV=1 gi\|15834430, gi\|... - gi\|15834430\|ref\|NP_313203.1\| 30S ribosomal protein S6 [Escherichia coli O157:H7 str. Sakai], gi\|1336... RS6_ECOL6 - 30S ribosomal protein S6 OS=Escherichia coli O6 GN=rpsF PE=3 SV=1 RS6_ECOLC - 30S ribosomal protein S6 OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=rpsF PE=3 SV=... gi\|254595619, gi... - gi\|254796219\|ref\|YP_003081056.1\| 30S ribosomal subunit protein S6 [Escherichia coli O157:H7 str. TW1... RS6_SHIF8 - 30S ribosomal protein S6 OS=Shigella flexneri serotype 5b (strain 8401) GN=rpsF PE=3 SV=1 gi\|254037220, gi... - gi\|254037220\|ref\|ZP_04871297.1\| 30S ribosomal subunit protein S6 [Escherichia sp. 1_1_43], gi\|226840... RS6_ECOBW - 30S ribosomal protein S6 OS=Escherichia coli (strain K12 / MC4100 / BW2952) GN=rpsF PE=3 SV=1 gi\|226901780, gi... - gi\|237703868\|ref\|ZP_04534349.1\| ribosomal protein S6 [Escherichia sp. 3_2_53FAA], gi\|226901780\|gb\|EE... gi\|227886756, gi... - gi\|227886756\|ref\|ZP_04004561.1\| ribosomal protein S6 [Escherichia coli 83972], gi\|227836329\|gb\|EEJ46...	2.0E-27	[2..130]	[3..126]
gi\|205348027, gi... - gi\|205348027\|gb\|EDZ34658.1\| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar Hadar ... gi\|195632912, gi... - gi\|195632912\|gb\|EDX51366.1\| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar Newpor... gi\|238910548 - gi\|238910548\|ref\|ZP_04654385.1\| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica serova... RS6_SALCH - 30S ribosomal protein S6 OS=Salmonella choleraesuis GN=rpsF PE=3 SV=1 RS6_SALPA - 30S ribosomal protein S6 OS=Salmonella paratyphi A GN=rpsF PE=3 SV=1 lcl\|NC_016856.1_... - [gene=rpsF] [protein=30S ribosomal protein S6] [protein_id=YP_005240706.1] [location=4643344..464373... gi\|213161637 - gi\|213161637\|ref\|ZP_03347347.1\| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica serova... gi\|213428643 - gi\|213428643\|ref\|ZP_03361393.1\| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica serova... gi\|213609730 - gi\|213609730\|ref\|ZP_03369556.1\| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica serova... gi\|213648999 - gi\|213648999\|ref\|ZP_03379052.1\| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica serova... gi\|204323394, gi... - gi\|204926729\|ref\|ZP_03217931.1\| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar Ja... RS6_SALG2 - 30S ribosomal protein S6 OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=rpsF PE=3 SV=1 RS6_SALEP - 30S ribosomal protein S6 OS=Salmonella enteritidis PT4 (strain P125109) GN=rpsF PE=3 SV=1 RS6_SALCH - 30S ribosomal protein S6 OS=Salmonella choleraesuis (strain SC-B67) GN=rpsF PE=3 SV=1 gi\|213028574 - gi\|213028574\|ref\|ZP_03343021.1\| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica serova... RS6_SALTY - 30S ribosomal protein S6 OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=rpsF PE=... RS6_SALA4 - 30S ribosomal protein S6 OS=Salmonella agona (strain SL483) GN=rpsF PE=3 SV=1 RS6_SALTI - 30S ribosomal protein S6 OS=Salmonella typhi GN=rpsF PE=3 SV=1 gi\|197240584, gi... - gi\|197262329\|ref\|ZP_03162403.1\| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar Sa... gi\|16763208 - gi\|16763208\|ref\|NP_458825.1\| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica serovar T... RS6_SALPK - 30S ribosomal protein S6 OS=Salmonella paratyphi A (strain AKU_12601) GN=rpsF PE=3 SV=1 gi\|29144687, gi\|... - gi\|29144687\|ref\|NP_808029.1\| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica serovar T... gi\|200389133, gi... - gi\|200389133\|ref\|ZP_03215745.1\| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar Vi... RS6_SALNS - 30S ribosomal protein S6 OS=Salmonella newport (strain SL254) GN=rpsF PE=3 SV=1 RS6_SALHS - 30S ribosomal protein S6 OS=Salmonella heidelberg (strain SL476) GN=rpsF PE=3 SV=1 RS6_SALPB - 30S ribosomal protein S6 OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=rpsF PE=3 SV=1 RS6_SALTI - 30S ribosomal protein S6 OS=Salmonella typhi GN=rpsF PE=3 SV=1 gi\|194457460, gi... - gi\|194471096\|ref\|ZP_03077080.1\| ribosomal protein S6 [Salmonella enterica subsp. enterica serovar Ke... RS6_SALTY - 30S ribosomal protein S6 OS=Salmonella typhimurium GN=rpsF PE=3 SV=1 RS6_SALSV - 30S ribosomal protein S6 OS=Salmonella schwarzengrund (strain CVM19633) GN=rpsF PE=3 SV=1 RS6_SALPA - 30S ribosomal protein S6 OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=rpsF PE=3 SV=1 RS6_CROS8 - 30S ribosomal protein S6 OS=Cronobacter sakazakii (strain ATCC BAA-894) GN=rpsF PE=3 SV=1 gi\|213864945 - gi\|213864945\|ref\|ZP_03387064.1\| 30S ribosomal protein S6 [Salmonella enterica subsp. enterica serova... RS6_SALPC - 30S ribosomal protein S6 OS=Salmonella paratyphi C (strain RKS4594) GN=rpsF PE=3 SV=1 gi\|283786874\|ref... - 30S ribosomal subunit protein S6 [Citrobacter rodentium ICC168] RS6_SALCH - 30S ribosomal protein S6 OS=Salmonella choleraesuis GN=rpsF PE=3 SV=1 RS6_SALTY - 30S ribosomal protein S6 OS=Salmonella typhimurium GN=rpsF PE=3 SV=1 RS6_SALPB - 30S ribosomal protein S6 OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=rpsF PE=3 SV=1	3.0E-27	[2..130]	[3..126]
gi\|239999183 - gi\|239999183\|ref\|ZP_04719107.1\| 30S ribosomal protein S6 [Neisseria gonorrhoeae 35/02] gi\|240118216 - gi\|240118216\|ref\|ZP_04732278.1\| 30S ribosomal protein S6 [Neisseria gonorrhoeae PID1] RS6_NEIG1 - 30S ribosomal protein S6 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=rpsF PE=3 SV=1 gi\|240123764 - gi\|240123764\|ref\|ZP_04736720.1\| 30S ribosomal protein S6 [Neisseria gonorrhoeae PID332] gi\|240016351 - gi\|240016351\|ref\|ZP_04722891.1\| 30S ribosomal protein S6 [Neisseria gonorrhoeae FA6140] gi\|240115918 - gi\|240115918\|ref\|ZP_04729980.1\| 30S ribosomal protein S6 [Neisseria gonorrhoeae PID18] gi\|240125955 - gi\|240125955\|ref\|ZP_04738841.1\| 30S ribosomal protein S6 [Neisseria gonorrhoeae SK-92-679] RS6_NEIGO - 30S ribosomal protein S6 OS=Neisseria gonorrhoeae GN=rpsF PE=3 SV=1 gi\|254493954, gi... - gi\|254493954\|ref\|ZP_05107125.1\| 30S ribosomal protein S6 [Neisseria gonorrhoeae 1291], gi\|226512994\|...	5.0E-27	[2..111]	[3..103]
RS6_RALSO - 30S ribosomal protein S6 OS=Ralstonia solanacearum GN=rpsF PE=3 SV=1 RS6_RALSO - 30S ribosomal protein S6 OS=Ralstonia solanacearum (strain GMI1000) GN=rpsF PE=3 SV=1	2.0E-26	[2..124]	[3..119]

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Predicted Domain #1

Region A:
Residues: [1-131]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYELIGLVR ITNSNAPKLE AKELSSTIGK LIIQNRGVVR DIVPMGIRYL PKIMKKDQEK  60
   61 HFRAYHFLML FDSSAAVQSE ILRTLKKDPR VIRSSIVKVD LDKQLDRASS LHRSLGKKSI 120
  121 LELVNEDYQS I

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	14.39794
Match:	1fjgF_
Description:	Ribosomal protein S6
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
structural constituent of ribosome	9.72663177460478	bayes_pls_golite062009
structural molecule activity	9.15324307340032	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: