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View Structure Prediction Details

Protein: YJR162C
Organism: Saccharomyces cerevisiae
Length: 116 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YJR162C.

Description E-value Query
Range
Subject
Range
GIN11_YEAST - Putative UPF0320 protein YLL065W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLL065W...
YLL065W - [DUBIOUS] Dubious open reading frame unlikely to encode a protein, based on available experimental a...
170.0 [0..1] [113..1]

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Predicted Domain #1
Region A:
Residues: [1-116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQYIPLSNL PYSHIPLHHP SLTISTKCTR IIMHGTCLSG LYPVPFTHNS HDYPHFNIYI  60
   61 SFGGPKYCIT ALNTYVIPLL HRILTTQFIY TYANITKKSP LKSPKHKNIL FFNHNT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 56.275724
Match: PF04318.3
Description: No description for PF04318.3 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.745 N/A N/A d.79.2 Tubulin/Dihydroxyacetone kinase C-terminal domain
View Download 0.719 N/A N/A d.80.1 Tautomerase/MIF
View Download 0.719 N/A N/A d.80.1 Tautomerase/MIF
View Download 0.691 N/A N/A d.109.1 Actin depolymerizing proteins
View Download 0.634 N/A N/A c.48.1 TK C-terminal domain-like
View Download 0.604 N/A N/A d.109.1 Actin depolymerizing proteins
View Download 0.578 N/A N/A d.79.2 Tubulin/Dihydroxyacetone kinase C-terminal domain
View Download 0.575 N/A N/A d.79.2 Tubulin/Dihydroxyacetone kinase C-terminal domain
View Download 0.564 N/A N/A d.79.2 Tubulin/Dihydroxyacetone kinase C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle