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View Structure Prediction Details

Protein: RPL43B, RPL43A
Organism: Saccharomyces cerevisiae
Length: 92 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPL43B, RPL43A.

Description E-value Query
Range		 Subject
Range
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
 1.0E-35 [9..91] [1523..1605]
RL37A_PSEMZ - 60S ribosomal protein L37a OS=Pseudotsuga menziesii GN=RPL37A PE=3 SV=1
gi|116785707, gi... - gi|148910142|gb|ABR18153.1| unknown [Picea sitchensis], gi|148908607|gb|ABR17413.1| unknown [Picea s...
 8.0E-30 [1..91] [1..91]
gi|224054734 - gi|224054734|ref|XP_002193580.1| PREDICTED: similar to mCG112980 [Taeniopygia guttata]
RL37A_CHICK - 60S ribosomal protein L37a OS=Gallus gallus GN=RPL37A PE=3 SV=2
gi|542152731|ref... - PREDICTED: 60S ribosomal protein L37a [Zonotrichia albicollis]
 1.0E-29 [1..91] [1..91]
R37A2_ARATH - 60S ribosomal protein L37a-2 OS=Arabidopsis thaliana GN=RPL37AC PE=3 SV=1
 2.0E-29 [1..91] [1..91]
gi|149710129 - gi|149710129|ref|XP_001490084.1| PREDICTED: similar to ribosomal protein L37a [Equus caballus]
gi|109100942 - gi|109100942|ref|XP_001085048.1| PREDICTED: similar to 60S ribosomal protein L37a [Macaca mulatta]
RL37A_PONAB - 60S ribosomal protein L37a OS=Pongo abelii GN=RPL37A PE=3 SV=3
tr|M3X7X6|M3X7X6... - Ribosomal protein L37a OS=Felis catus GN=RPL37A PE=3 SV=1
CCDS2404.1_1 - null
gi|57111003, gi|... - gi|57111003|ref|XP_536063.1| PREDICTED: similar to 60S ribosomal protein L37a [Canis familiaris], gi...
tr|G3H3Z5|G3H3Z5... - 60S ribosomal protein L37a OS=Cricetulus griseus GN=H671_2g6390 PE=3 SV=1
gi|114583227 - gi|114583227|ref|XP_516077.2| PREDICTED: similar to ribosomal protein L37a [Pan troglodytes]
gi|213511444, gi... - gi|223672499|gb|ACN12431.1| 60S ribosomal protein L37a [Salmo salar], gi|223672479|gb|ACN12421.1| 60...
ENSOCUP000000085... - pep:novel chromosome:oryCun2:1:139135541:139135819:-1 gene:ENSOCUG00000009905 transcript:ENSOCUT0000...
RL37P_RAT - Putative 60S ribosomal protein L37a OS=Rattus norvegicus GN=Rpl37a-ps1 PE=5 SV=2
gi|225705000 - gi|225705000|gb|ACO08346.1| 60S ribosomal protein L37a [Oncorhynchus mykiss]
RL37A_MOUSE - 60S ribosomal protein L37a OS=Mus musculus GN=Rpl37a PE=1 SV=2
gi|57123 - gi|57123|emb|CAA32232.1| unnamed protein product [Rattus rattus]
RL37A_PONPY - 60S ribosomal protein L37a - Pongo pygmaeus (Orangutan)
RPL37A - ribosomal protein L37a
RL37A_BOVIN - 60S ribosomal protein L37a OS=Bos taurus GN=RPL37A PE=3 SV=3
 2.0E-29 [1..91] [1..91]
gi|12850492 - gi|12850492|dbj|BAB28742.1| unnamed protein product [Mus musculus]
 3.0E-29 [1..91] [1..91]
RL37A_OSTOS - 60S ribosomal protein L37a OS=Ostertagia ostertagi GN=rpl-37a PE=3 SV=3
 4.0E-29 [1..91] [1..91]
RL37A_CRYST - 60S ribosomal protein L37a OS=Cryptochiton stelleri GN=RPL37A PE=3 SV=3
 4.0E-29 [1..92] [1..92]
RL37A_ICTPU - 60S ribosomal protein L37a OS=Ictalurus punctatus GN=rpl37a PE=3 SV=3
 6.0E-29 [1..91] [1..91]

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Predicted Domain #1
Region A:
Residues: [1-92] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKRTKKVGI TGKYGVRYGS SLRRQVKKLE IQQHARYDCS FCGKKTVKRG AAGIWTCSCC  60
   61 KKTVAGGAYT VSTAAAATVR STIRRLREMV EA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 267.9897
Match: 1k5y2_
Description: No description for 1k5y2_ was found.
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle