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View Structure Prediction Details

Protein: ACF4
Organism: Saccharomyces cerevisiae
Length: 309 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACF4.

Description E-value Query
Range
Subject
Range
ACF4_YEAST - Assembly-complementing factor 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ACF4 PE=...
ACF4 - Protein of unknown function, computational analysis of large-scale protein-protein interaction data ...
0.0 [1..309] [1..309]

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Predicted Domain #1
Region A:
Residues: [1-309]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEDQRVISQ PIELHKLSIV DKHSQGQQQQ PHQKQHEVQP ESKSPRVTTP LKPKRLAIPI  60
   61 SSPQRSTTNQ SPVSDHASPI STDQDLIYKL AAKHREINEL SFKLEVAQKE LKQLELQFKD 120
  121 TLPRNGQQKL GNQNPSEYLS TFTKRIQQTF VDVNNSPNML KGKKSINDFF SKPNNNVNSN 180
  181 INNTLPNRKP NPPPNRSQRM QNIAPSRSSE STPTSGPPLL PPRNTMKNAN TTATAGENTP 240
  241 FLQRILNKFN QMNMEEDEFD DLLEKRKSKK DHYYIKENLG YEYDEVRSED EDDEEFEPMG 300
  301 DIPVHLFKR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle