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View Structure Prediction Details

Protein: MIR1
Organism: Saccharomyces cerevisiae
Length: 311 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MIR1.

Description E-value Query
Range
Subject
Range
ADT1_BOVIN - ADP/ATP translocase 1 OS=Bos taurus GN=SLC25A4 PE=1 SV=3
9.0E-84 [12..297] [3..297]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
1.0E-83 [1..299] [178..471]
ADT1_MOUSE - ADP/ATP translocase 1 OS=Mus musculus GN=Slc25a4 PE=1 SV=4
2.0E-83 [12..297] [3..297]
ADT1_RAT - ADP/ATP translocase 1 OS=Rattus norvegicus GN=Slc25a4 PE=1 SV=3
4.0E-83 [12..297] [3..297]
gi|90085585 - gi|90085585|dbj|BAE91533.1| unnamed protein product [Macaca fascicularis]
SLC25A6 - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6
4.0E-83 [13..298] [4..298]
ADT1_RABIT - ADP/ATP translocase 1 OS=Oryctolagus cuniculus GN=SLC25A4 PE=2 SV=3
7.0E-83 [12..297] [3..297]

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Predicted Domain #1
Region A:
Residues: [1-311]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVSAAPAIP QYSVSDYMKF ALAGAIGCGS THSSMVPIDV VKTRIQLEPT VYNKGMVGSF  60
   61 KQIIAGEGAG ALLTGFGPTL LGYSIQGAFK FGGYEVFKKF FIDNLGYDTA SRYKNSVYMG 120
  121 SAAMAEFLAD IALCPLEATR IRLVSQPQFA NGLVGGFSRI LKEEGIGSFY SGFTPILFKQ 180
  181 IPYNIAKFLV FERASEFYYG FAGPKEKLSS TSTTLLNLLS GLTAGLAAAI VSQPADTLLS 240
  241 KVNKTKKAPG QSTVGLLAQL AKQLGFFGSF AGLPTRLVMV GTLTSLQFGI YGSLKSTLGC 300
  301 PPTIEIGGGG H

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 7.75
Match: 1is2A
Description: Peroxisomal acyl-CoA oxidase-II, domains 3 and 4; Peroxisomal acyl-CoA oxidase-II, domains 1 and 2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle