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View Structure Prediction Details

Protein: YJR030C
Organism: Saccharomyces cerevisiae
Length: 745 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YJR030C.

Description E-value Query
Range
Subject
Range
gi|1129158 - gi|1129158|emb|CAA60727.1| J1575L [Saccharomyces cerevisiae]
0.0 [1..741] [1..741]

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Predicted Domain #1
Region A:
Residues: [1-420]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELFNKEEAS FETLLKRLLV VCESHSRYHG SSLDPMVKVG HEMRKISGYL RCILRKHAAN  60
   61 HDDMSLTQSI VNSYKSLFKD AQILDLYHNL LFGCMHLLLD ANMSYFRMDS QKLFAVLLFK 120
  121 VYYKLRDIFY VTNEVRLGSL ISAFVYKFKS CYDFISCNSL KYGSVRDVIS GEVSLINLPP 180
  181 IDSNKVINRA YYRLDVKKLA INNKLVEILE LDNGEIAIFE VLSEKMPYTL QTIDNLFQSL 240
  241 ALGNHDLMNV GRSLLFRPFR SGDLDLIRLD DSGAKLKVPI NNSIVLRLTC KDPIQWQEYW 300
  301 KHVIRKLFDS TATKEYKRSG SKISQQVYVR SNNPDYTSPK RNDDMPISSV KISDTIHNGR 360
  361 TLHRSIPLPG SLSSLIETSN EYPDEESLSI MSERATVSED SDLDTSLKDI ESLSCEKLIE 420
  421 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [421-745]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDKSIQVPLS PKYMDTPTLK NIRTASQTFS LESVSPELIE SVASEIDDSE SIISEDGKDK  60
   61 RDKDLFDPDI DFYKPTLYRR KSSSLLSIFS KNKKNLTIDI PKNHSRSLFS LPGNQQSVTP 120
  121 VSATPHDDNV DETYVSFPLS INTSGGAVYF ENDSVKVSLW NGKSWVPLSK DMLCLSLILS 180
  181 GDNETLLIVY KDFEKEKCKL VVKLEPTWKY NRSTAQDVQL RIPSSDFKAS VFGTLHDLTL 240
  241 SIRCAQAAKL VNVLQYQLQS SQTSSLSPST TTGTLSTVSS SSCFSRNVTR SSTENSELAN 300
  301 MKDSSEYISS SLLLSSVKVR QLRNM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle