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View Structure Prediction Details

Protein: REC107
Organism: Saccharomyces cerevisiae
Length: 314 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for REC107.

Description E-value Query
Range
Subject
Range
RE107_YEAST - Recombination protein 107 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=REC107 PE=1 SV...
REC107 - Protein involved in early stages of meiotic recombination; involved in coordination between the init...
0.0 [1..314] [1..314]

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Predicted Domain #1
Region A:
Residues: [1-191]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVARGRTDEI STDVSEANSE HSLMITETSS PFRSIFSHSG KVANAGALEE SDKQILEWAG  60
   61 KLELESMELR ENSDKLIKVL NENSKTLCKS LNKFNQLLEQ DAATNGNVKT LIKDLASQIE 120
  121 NQLDKVSTAM LSKGDEKKTK SDSSYRQVLV EEISRYNSKI TRHVTNKQHE TEKSMRCTQE 180
  181 MLFNVGSQLE D

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [192-314]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VHKVLLSLSK DMHSLQTRQT ALEMAFREKA DHAYDRPDVS LNGTTLLHDM DEAHDKQRKK  60
   61 SVPPPRMMVT RSMKRRRSSS PTLSTSQNHN SEDNDDASHR LKRAARTIIP WEELRPDTLE 120
  121 SEL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle