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View Structure Prediction Details

Protein: YJR015W
Organism: Saccharomyces cerevisiae
Length: 510 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YJR015W.

Description E-value Query
Range
Subject
Range
YJR015W - Putative protein of unknown function; localizes to the endoplasmic reticulum and cytoplasm; predicte...
YJY5_YEAST - Uncharacterized endoplasmic reticulum membrane protein YJR015W OS=Saccharomyces cerevisiae (strain A...
0.0 [1..510] [1..510]

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Predicted Domain #1
Region A:
Residues: [1-510]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSLDDIEP TAYNNMEADE EYCRRNDIHD LSSVVGDAVS QGVPDMDGQT TDSSKDPEPN  60
   61 SEDKKAFPPS SGSFFSPNLQ GQRKKVLLKF VFTNCLLAII CFTMFVLFWG ALYDTSKYLH 120
  121 KVKLLVVIQE PPVVILDNNS SMVVPSISYA LPTFINKIPC DWDIYNSPTF QAKFDVNTPQ 180
  181 QVNDKVVDLV YDEKYWFAIN IKPNATETLF ESLINDTAPL FNSTLFNQVV YETGRDPTNL 240
  241 KSTILPVAQT IEEYYHTFYT LNYLPPLLTN ITQVYRYALT NNARYIAAAG KYNYEYYDHR 300
  301 PFTDRILLAP TQIGVVYCLL LTFFQFLLYG PLHVEMAKVL RPANGLIYRI AMSWFTFFFA 360
  361 SLFFCTTTAI FQVDFTKSFG RGGFVVYWMS TWLFMLAAGG ANENAVMLVI TLGPQYLGFW 420
  421 ILSFVILNIA PSFFPLALNN NVYRYGYMMP VHNVIDIYRV IFFDVTRRKM GRNYGILVAL 480
  481 IALNTALLPF VGKYASRKLK QKALVAAKQS 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle