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View Structure Prediction Details

Protein: NCE101
Organism: Saccharomyces cerevisiae
Length: 53 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NCE101.

Description E-value Query
Range
Subject
Range
gi|49655474 - gi|49655474|emb|CAG88045.1| DEHA2E11440p [Debaryomyces hansenii]
gi|50422477, gi|... - gi|50422477|ref|XP_459806.1| hypothetical protein DEHA0E12034g [Debaryomyces hansenii CBS767], gi|49...
55.0 [0..2] [50..1]
gi|50547927, gi|... - gi|50547927|ref|XP_501433.1| YALI0C04257p [Yarrowia lipolytica], gi|49647300|emb|CAG81732.1| unnamed...
gi|49647300 - gi|49647300|emb|CAG81732.1| YALI0C04257p [Yarrowia lipolytica]
48.0 [0..14] [50..39]

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Predicted Domain #1
Region A:
Residues: [1-53]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQYAPFLLG KFSDPLLAIM VGCLSYYVYE RKMGRPQGHH LHELIKKRWD DRK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.816 a.8.1 Bacterial immunoglobulin/albumin-binding domains
View Download 0.673 a.4.7 Ribosomal protein L11, C-terminal domain
View Download 0.663 a.8.1 Bacterial immunoglobulin/albumin-binding domains
View Download 0.557 a.32.1 Transcription factor IIA (TFIIA), alpha-helical domain
View Download 0.515 a.32.1 Transcription factor IIA (TFIIA), alpha-helical domain
View Download 0.463 f.28.1 Nonheme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
View Download 0.423 a.2.9 C-terminal UvrC-binding domain of UvrB
View Download 0.423 a.2.9 C-terminal UvrC-binding domain of UvrB
View Download 0.381 a.144.1 PABC (PABP) domain
View Download 0.367 a.8.1 Bacterial immunoglobulin/albumin-binding domains


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle