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View Structure Prediction Details

Protein: YJL202C
Organism: Saccharomyces cerevisiae
Length: 115 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YJL202C.

Predicted Domain #1
Region A:
Residues: [1-115]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKRQNTYAV NSDTCAQLRC IINLYILLAN FDFHEAYFLL FFNLVSPTAL ILRFLPLLSP  60
   61 PFCLPWSDTI FSSSFVGLIL SNNLIPVCTL RSLICSKSRE PSKISVSSGI ENFAT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.673 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.601 a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
View Download 0.601 a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
View Download 0.598 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.569 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.558 a.287.1 Description not found.
View Download 0.553 a.39.1 EF-hand
View Download 0.481 a.118.13 Arp2/3 complex 16 kDa subunit ARPC5
View Download 0.397 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.375 a.118.12 Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle