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View Structure Prediction Details

Protein: FMP33
Organism: Saccharomyces cerevisiae
Length: 180 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FMP33.

Description E-value Query
Range
Subject
Range
gi|49640987 - gi|49640987|emb|CAH02248.1| KLLA0B07337p [Kluyveromyces lactis]
gi|49640987, gi|... - gi|50303817|ref|XP_451855.1| unnamed protein product [Kluyveromyces lactis], gi|49640987|emb|CAH0224...
67.0 [0..1] [168..1]

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Predicted Domain #1
Region A:
Residues: [1-180]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYTRLLRHN SQFTKFSGTS PNLGSKPLFS KGNLYTSLLV TTLYGTGLAC LYLESNSLNK  60
   61 SKEQEDPHAI AEDDIVNIVH DAPNRIFKPA LDTYQEKELD LQKSDLHKVL HSLTYSDVSQ 120
  121 FSIVWGFLIQ LSSLIGNSTL GKKSILYKGS VVSVLGFPPL IYMALKLRMK QLEKAGVRFE 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.305 a.24.9 alpha-catenin/vinculin
View Download 0.305 a.24.9 alpha-catenin/vinculin
View Download 0.303 a.22.1 Histone-fold
View Download 0.261 d.2.1 Lysozyme-like
View Download 0.232 d.110.2 GAF domain-like
View Download 0.227 a.91.1 Regulator of G-protein signalling, RGS
View Download 0.227 a.91.1 Regulator of G-protein signalling, RGS
View Download 0.208 f.21.2 Fumarate reductase respiratory complex transmembrane subunits


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle