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View Structure Prediction Details

Protein: CIS3
Organism: Saccharomyces cerevisiae
Length: 227 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CIS3.

Description E-value Query
Range
Subject
Range
PIR5_YEAST - Cell wall protein PIR5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PIR5 PE=2 SV=2
YJL160C - Putative protein of unknown function; member of the PIR (proteins with internal repeats) family of c...
267.0 [0..1] [227..1]
gi|49526830 - gi|49526830|emb|CAG60457.1| unnamed protein product [Candida glabrata]
gi|50290177, gi|... - gi|50290177|ref|XP_447520.1| hypothetical protein CAGL0I06204g [Candida glabrata CBS138], gi|4952683...
249.0 [0..1] [227..96]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQFKNVALAA SVAALSATAS AEGYTPGEPW STLTPTGSIS CGAAEYTTTF GIAVQAITSS  60
   61 KAKRDVISQI GDGQVQATSA ATAQATDSQA QATTTATPTS SEKISSSASK TSTNATSSSC 120
  121 ATPSLKDSSC KNSGTLELTL KDGVLTDAKG RIGSIVANRQ FQF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [164-227]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DGPPPQAGAI YAAGWSITED GYLALGDSDV FYQCLSGNFY NLYDQNVAEQ CSAIHLEAVS  60
   61 LVDC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle