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View Structure Prediction Details

Protein: YJL107C
Organism: Saccharomyces cerevisiae
Length: 387 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YJL107C.

Description E-value Query
Range
Subject
Range
YJK7_YEAST - Uncharacterized UPF0442 protein YJL107C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=...
YJL107C - Putative protein of unknown function; expression is induced by activation of the HOG1 mitogen-activa...
0.0 [1..387] [1..387]
SPAC7D4.12c - DUF1212 family protein
YFPC_SCHPO - Uncharacterized UPF0442 protein C7D4.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=S...
3.0E-81 [155..381] [139..366]
PRM10_MILFA - Pheromone-regulated membrane protein 10 OS=Millerozyma farinosa PE=3 SV=1
3.0E-35 [159..279] [37..138]

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Predicted Domain #1
Region A:
Residues: [1-109]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGRNEKPTT PVSDFRVGSS EQSQAGVNLE DSSDHRTSNS AESKKGNLSG KSISDLGISN  60
   61 NDNKNVRFTA DTDALENDLS SRSTETSDNS KGTDGQDEED RPARHKRKP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [110-302]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KVSFTHLRNN GKDGDDETFI KKIINNLTGN QGGLVPGLAP IPSENENGKN DIEKNNRNEE  60
   61 IPLSDLADAS KIVDVHEGDD KEKLEALKLE GDVNCTSDGE TLGSSSKNSF LAPAVDHFDD 120
  121 YAENNSSDDN EGFIETSTYV PPPSQVKSGV LGSLLKLYQN EDQNSSSIFS DSQAVTTDDE 180
  181 GISSTAGNKD VPV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [303-387]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AKRSRLQNLK GKAKKGRMPR LKKRLKTEAK ITVHIADILQ RHRFILRMCR ALMMYGAPTH  60
   61 RLEEYMVMTS RVLEIDGQFC IFQVV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle