| Protein: | LSB6 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 607 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LSB6.
| Description | E-value | Query Range |
Subject Range |
|
|
580.0 | [0..149] | [607..9] |
|
|
578.0 | [0..149] | [607..134] |
|
|
495.0 | [0..75] | [525..35] |
|
|
472.0 | [0..57] | [525..9] |
|
|
451.0 | [0..75] | [525..43] |
|
|
451.0 | [0..75] | [525..43] |
|
Region A: Residues: [1-107] |
1 11 21 31 41 51
| | | | | |
1 MSNEAYQHDH TVNPHQKIVV NSYDWLQFRD EQDHCKSKNP ITHASPGVGS NAQNSDIAEA 60
61 PQVFHPSYQS LVNVPSESPR PDQTSGSNPA VGLLHNAEDK ASGQEEE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [108-401] |
1 11 21 31 41 51
| | | | | |
1 GSQYEIQYSV FRPLHAYPTK GLAYEQLRRK EEQEQRENFN HLVSDCIEAV ETFGRELERI 60
61 QTGSSGSYFV YGTRADESVP VGVFKPKDEE PYGPFSPKWT KWAHRTFFPC LFGRSCLIPN 120
121 LGYICESAAS LLDRRLETHL VPYTDTASIE SFNFYDNRKK WVLGYNLQKK KQKKLGSFQL 180
181 FLKEYINADE FFHKYPLPGM YSDVKHSFHR KSSGEDINHK PETTRNLTDE TEPSKQINSS 240
241 PISTESEENS KFEWTESSLS QFRLELEKLI ILDYIMRNTD RGLDNWMVKL IKLS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [402-555] |
1 11 21 31 41 51
| | | | | |
1 NNKWRLKLAA IDNGLSFPWK HPDEWRLYPY GWLYLPLQLL AKPFSEQMRS HFLPILTSTN 60
61 WWEESYQEFL ALFSRDQDFN VRMWKKQWAV LKGQAFNVVE TLKDPRQGPL ELVRRTRCQV 120
121 IDEKMQVPCC PPPVSIFKNA IDEPIGSYST SPMV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [556-607] |
1 11 21 31 41 51
| | | | | |
1 LPSTPSTIPF HAHNQSNSNP VYYDSTLHPF ANKTVIAERL QIVNSTPVFT WC
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
