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View Structure Prediction Details

Protein: SAP185
Organism: Saccharomyces cerevisiae
Length: 1058 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SAP185.

Description E-value Query
Range
Subject
Range
gi|728712 - gi|728712|emb|CAA59396.1| YKR028w homologue [Saccharomyces cerevisiae]
874.0 [0..1] [853..1]
ekc1 - protein phosphatase regulatory subunit Ekc1
EKC1_SCHPO - Extragenic suppressor of kinetochore protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843...
690.0 [0..130] [946..1]
gi|44984558, gi|... - gi|45198607|ref|NP_985636.1| AFR089Wp [Ashbya gossypii ATCC 10895], gi|44984558|gb|AAS53460.1| AFR08...
gi|44984558 - gi|44984558|gb|AAS53460.1| AFR089Wp [Ashbya gossypii ATCC 10895]
639.0 [0..1] [1048..1]
gi|148672414, gi... - gi|54145496|ref|NP_081089.1| SAPS domain family, member 2 isoform 1 [Mus musculus], gi|148672415|gb|...
617.0 [0..130] [653..1]

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Predicted Domain #1
Region A:
Residues: [1-124]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGSFWKFGQ DFGSQSPLAK LLNRAFIKID DKPTSTEAGK IDSNSTDESL ESNSFKSEDE  60
   61 EEEYELPNRE EDYKAYKPNL SLLNDLLDDE ELYTELMCSN FKLLVYLKYP EVLSKLIDYV 120
  121 RNST

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [125-696]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ILESNIDRVT SEDRDLVRGE DKDTTEDFEN AKADKKNIDG TFEEKERTRS GEEEELENEE  60
   61 NDSASEDTRV TLPHELEEHD DTRRARIAAE ILSADVWPIS SALIENEGLL AKLWSILRLP 120
  121 SPLSIEASTY FMKINERLLD MNMDGIIEFI LKKEHIVDDF LAHIDNPPLM DFLLKVISTD 180
  181 KPEISNGVIQ LFKKQNLVPK LIHLLDPVFD SCTQSAAGDF LKALVTISGN CPNEITSSIG 240
  241 PNELTRQLVS PNMMKQLMDI MLKGGNSLNN GVGIIIELIR KNNSDYDTIQ TNYTTIESHP 300
  301 PTDRDPIYLG YLVKMFSEHM ADFNKILTEK KIPLLQTSYG TIEPLGFERF KICELIAELL 360
  361 HCSNMTLLNE PSAYDIVRER DAERERIFNS QNYVDSNDRS ELKENEDDNT GDADDEVEDD 420
  421 TNQVESANTS IDGEEVIDKL NSLQIETNKV NQNMNNEEQH SLMPDFNNGD FKDEEDENPF 480
  481 EPQYSDVILD SSDIEKNFRV SPNVGDQLKI SLQDTRVIDT MLEMFFHFQW NNFLHNVVYD 540
  541 VVQQIFNGPL KIGYNRFLLD DLLINIRLTD MI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [697-749]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 INGNNECIEY EKGHDTRLGY MGHLTLIAEE VTKFTAYIEE MNITFENTEV MSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [750-1058]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LFESKWIAYT EDVLEDLKEK YNAILGDIAE EGDMLQDEEE DAVYDKGERT MGTVDDYIND  60
   61 IMQMDNVRCQ EEEEDEGEGY VSFDEDEPQE YRNGDSVRSK ESNSSEGKRD QEQLYYEYVN 120
  121 EDGTKTRLNF NPDSDATEQV PGEVNRDHKI PLKLKRSFTD ACKSETIPNN TVNAKEESVF 180
  181 QFSNELSDGW ESSPSNSIPK RASPSKNGMN SPMFQHQFEL HSPTDEFGGH KDEILSAEGH 240
  241 DYDIDEYDEL SDDSDEEYDN CEDEDSLDYA DSAAYALCRS KSKDKISWDE EEQARLMGVV 300
  301 KFNSEHYRD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle