| Protein: | IML2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 731 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IML2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..731] | [1..731] |
|
|
0.0 | [71..728] | [40..628] |
|
|
0.0 | [112..730] | [36..561] |
|
|
0.0 | [120..728] | [54..586] |
|
|
0.0 | [111..726] | [54..571] |
|
|
0.0 | [130..727] | [60..575] |
|
Region A: Residues: [1-215] |
1 11 21 31 41 51
| | | | | |
1 MFRVFGSFGS KGNQSSGEEQ STKTKQVLKQ ANDFEIALKA MDFVLDDRTD EGLNLLKKAE 60
61 METGSDQTIL TLARGVIEFL QATLSFETEE MKRAAITLGK AEQMSWKSKQ NAEKTNFRSS 120
121 SIYPPGTVYA VTYTESCLLH ALLMLFSESM MEAAKALLKL RRAYTMLQDI MVTVKKAERS 180
181 KNSSSPSPSE KSQESCGSFV SAETTFISVD IPYKL
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [216-386] |
1 11 21 31 41 51
| | | | | |
1 SSEDKSNPLL LEFAEKIYTM RMGRLSGAHI GNTPSFHRLR DDLGLQTTPS QASDRHSVSD 60
61 DFDLEQATID EFIHSGANLC YGILQVVLSL LPPAIGAVLS IVGFKGSREE GLRLVWKATK 120
121 ERNVHGCIGL LGLMFYYDGP FQFTDADFDI PPNDNGSRAL NKSRTNDSSL L
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.256 | d.2.1 | Lysozyme-like |
| View | Download | 0.201 | c.55.1 | Actin-like ATPase domain |
| View | Download | 0.424 | a.23.2 | Diol dehydratase, gamma subunit |
|
Region A: Residues: [387-543] |
1 11 21 31 41 51
| | | | | |
1 PGYMDSATLL HPGKILEDAL LKARALFPNS ALWLLNEAKM LAGKGRLRDS LALMDSIDVN 60
61 SIRMRQVKSL MVFERAILLV NLHEYNRAAD DLISLLDISD WSHALYTYFA GCCYLENWRM 120
121 TQLGLLNDGK EQFYKERARE LIFDAPSLLG KKTFKSK
|
| Detection Method: | |
| Confidence: | 10.29 |
| Match: | 1fchA |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [544-635] |
1 11 21 31 41 51
| | | | | |
1 NLPLDRFMLR KVQQFNNMQK KLNLQEPLDS IATSPVHELA YFYNGYNRMT ENDLILTKKM 60
61 LTEYHNPAID SEDPDQELIR NLLLSLTLRR LG
|
| Detection Method: | |
| Confidence: | 10.29 |
| Match: | 1fchA |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [636-731] |
1 11 21 31 41 51
| | | | | |
1 DAERGLALLD DIVLPKIFYI QNGKVKYFKK TEDPWAYPAA LYERALFCWK LGGMESLNEC 60
61 REWLLRAQNY AADYELSTRI GMKIKAALDR VENALA
|
| Detection Method: | |
| Confidence: | 10.29 |
| Match: | 1fchA |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
| Matching Structure (courtesy of the PDB): |
|
