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View Structure Prediction Details

Protein: MPM1
Organism: Saccharomyces cerevisiae
Length: 252 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MPM1.

Description E-value Query
Range
Subject
Range
gi|207343993 - gi|207343993|gb|EDZ71278.1| YJL066Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|190409432 - gi|190409432|gb|EDV12697.1| hypothetical protein SCRG_03603 [Saccharomyces cerevisiae RM11-1a]
MPM1 - Mitochondrial membrane protein of unknown function, contains no hydrophobic stretches
MPM1_YEAST - Mitochondrial peculiar membrane protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) G...
0.0 [1..252] [1..252]

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Predicted Domain #1
Region A:
Residues: [1-252]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFYEGDDND ANTKAFNDKY IKDQKFATAP FWNLFPKLRD IDEYDNPLLP LPFNFNFRDL  60
   61 GDSALAMASG IPTVKQFDKC EELKGQSAWT TQGIWKCLVP SKAIPPLPQL DFLLPLEEIK 120
  121 SDKSHSHGLF FNDFNLFLKW RSHMNRLQKQ RIKTRSTAVE PLARTPEDLM LNWDDLHLGN 180
  181 DAEYASADGS KKIVGRAQSI STTKDSNDAK PSTVKTEKIY FDDGTVDITT TTTSKGSSPQ 240
  241 VKHKVVSVDE DN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle