Protein: | NUP82 |
Organism: | Saccharomyces cerevisiae |
Length: | 713 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NUP82.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..713] | [1..713] |
|
6.0E-4 | [506..706] | [356..547] |
|
0.002 | [506..709] | [358..548] |
Region A: Residues: [1-200] |
1 11 21 31 41 51 | | | | | | 1 MSQSSRLSAL PIFQASLSAS QSPRYIFSSQ NGTRIVFIQD NIIRWYNVLT DSLYHSLNFS 60 61 RHLVLDDTFH VISSTSGDLL CLFNDNEIFV MEVPWGYSNV EDVSIQDAFQ IFHYSIDEEE 120 121 VGPKSSIKKV LFHPKSYRDS CIVVLKEDDT ITMFDILNSQ EKPIVLNKPN NSFGLDARVN 180 181 DITDLEFSKD GLTLYCLNTT |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [201-474] |
1 11 21 31 41 51 | | | | | | 1 EGGDIFAFYP FLPSVLLLNE KDLNLILNKS LVMYESLDST TDVIVKRNVI KQLQFVSKLH 60 61 ENWNSRFGKV DIQKEYRLAK VQGPFTINPF PGELYDYTAT NIATILIDNG QNEIVCVSFD 120 121 DGSLILLFKD LEMSMSWDVD NYVYNNSLVL IERVKLQREI KSLITLPEQL GKLYVISDNI 180 181 IQQVNFMSWA STLSKCINES DLNPLAGLKF ESKLEDIATI ERIPNLAYIN WNDQSNLALM 240 241 SNKTLTFQNI SSDMKPQSTA AETSISTEKS DTVG |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [475-713] |
1 11 21 31 41 51 | | | | | | 1 DGFKMSFTQP INEILILNDN FQKACISPCE RIIPSADRQI PLKNEASENQ LEIFTDISKE 60 61 FLQRIVKAQT LGVSIHNRIH EQQFELTRQL QSTCKIISKD DDLRRKFEAQ NKKWDAQLSR 120 121 QSELMERFSK LSKKLSQIAE SNKFKEKKIS HGEMKWFKEI RNQILQFNSF VHSQKSLQQD 180 181 LSYLKSELTR IEAETIKVDK KSQNEWDELR KMLEIDSKII KECNEELLQV SQEFTTKTQ |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.