| Protein: | TIM54 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 478 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TIM54.
| Description | E-value | Query Range |
Subject Range |
|
|
428.0 | [0..20] | [469..2] |
|
|
373.0 | [0..8] | [467..2] |
|
|
355.0 | [0..4] | [467..16] |
|
|
330.0 | [0..14] | [467..19] |
|
|
282.0 | [0..32] | [467..4] |
|
|
266.0 | [0..217] | [456..115] |
|
|
256.0 | [0..26] | [473..2] |
|
|
250.0 | [0..20] | [473..24] |
|
|
236.0 | [0..16] | [476..417] |
|
Region A: Residues: [1-166] |
1 11 21 31 41 51
| | | | | |
1 MSSESGKPIA KPIRKPGYTN PALKALGIPA LRLPSRNWMI FWSVLTVSIG GIAYDKYKQR 60
61 QILSHATDLV KPLAEESMEV DKVPRKITVF IAPPPNDYLE SSLKVWRRYV KPVLYYAGLD 120
121 YELVQEDRQG IIRTNVANRI RELRKEILAS TDGQPVKEPN QTVAKP
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.440 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.411 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.371 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.371 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.355 | N/A | N/A | a.7.4 | Smac/diablo |
| View | Download | 0.355 | N/A | N/A | a.7.4 | Smac/diablo |
| View | Download | 0.352 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.313 | N/A | N/A | a.47.1 | STAT |
| View | Download | 0.302 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.255 | N/A | N/A | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
|
Region A: Residues: [167-339] |
1 11 21 31 41 51
| | | | | |
1 SGSSTSKISS LLPFNKIIQD PAEEDDSFDP EIGKKFKENF DWRNVIGIFY TMPKPKHIIS 60
61 EDALTKDPIL SGGVICLGRG AYKEYIAGIH EGLLGPIEKT EKTGSTEPKM TGVVEANQIE 120
121 SKVSESGATE LVDAEKETAL EEAKVQDDLK VDEENSSEDS QKFLKPFISS DQY
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [340-478] |
1 11 21 31 41 51
| | | | | |
1 PDLQIASELQ TPNGEFIRNP NTNIPLLINQ PLLVIPIPNL IGFTTIPRRI HRFYQKRFYV 60
61 EDVCSSVVNC VRQTRIRPFD IAKDIDLAKD EEKDWPQNWV KQGKEKNSEW TQELVCDPRI 120
121 TKHMFVYEKP PKEEPESDI
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.244 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.238 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.238 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.219 | N/A | N/A | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
