Protein: | VTC4 |
Organism: | Saccharomyces cerevisiae |
Length: | 648 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VTC4.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..558] | [1..546] |
|
0.0 | [1..505] | [1..528] |
|
0.0 | [1..505] | [1..528] |
|
0.0 | [1..512] | [1..584] |
|
0.0 | [1..497] | [1..469] |
|
0.0 | [231..512] | [36..343] |
|
1.0E-65 | [180..459] | [11..258] |
Region A: Residues: [1-194] |
1 11 21 31 41 51 | | | | | | 1 MKFGEHLSKS LIRQYSYYYI SYDDLKTELE DNLSKNNGQW TQELETDFLE SLEIELDKVY 60 61 TFCKVKHSEV FRRVKEVQEQ VQHTVRLLDS NNPPTQLDFE ILEEELSDII ADVHDLAKFS 120 121 RLNYTGFQKI IKKHDKKTGF ILKPVFQVRL DSKPFFKENY DELVVKISQL YDIARTSGRP 180 181 IKGDSSAGGK QQNF |
Detection Method: | |
Confidence: | 49.026872 |
Match: | PF03105 |
Description: | SPX domain |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [195-498] |
1 11 21 31 41 51 | | | | | | 1 VRQTTKYWVH PDNITELKLI ILKHLPVLVF NTNKEFERED SAITSIYFDN ENLDLYYGRL 60 61 RKDEGAEAHR LRWYGGMSTD TIFVERKTHR EDWTGEKSVK ARFALKERHV NDFLKGKYTV 120 121 DQVFAKMRKE GKKPMNEIEN LEALASEIQY VMLKKKLRPV VRSFYNRTAF QLPGDARVRI 180 181 SLDTELTMVR EDNFDGVDRT HKNWRRTDIG VDWPFKQLDD KDICRFPYAV LEVKLQTQLG 240 241 QEPPEWVREL VGSHLVEPVP KFSKFIHGVA TLLNDKVDSI PFWLPQMDVD IRKPPLPTNI 300 301 EITR |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [499-648] |
1 11 21 31 41 51 | | | | | | 1 PGRSDNEDND FDEDDEDDAA LVAAMTNAPG NSLDIEESVG YGATSAPTSN TNHVVESANA 60 61 AYYQRKIRNA ENPISKKYYE IVAFFDHYFN GDQISKIPKG TTFDTQIRAP PERRYVCQFV 120 121 WNQKFTLPLK EPTCLGCPSR YCWAVSPLLY |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.