| Protein: | YVH1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 364 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YVH1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..364] | [1..364] |
|
|
5.0E-82 | [3..346] | [18..328] |
|
|
5.0E-80 | [2..345] | [15..327] |
|
|
2.0E-79 | [2..346] | [17..329] |
|
|
2.0E-62 | [5..342] | [37..324] |
|
|
9.0E-59 | [9..342] | [33..375] |
|
|
1.0E-47 | [7..289] | [48..332] |
|
|
2.0E-47 | [12..346] | [1..270] |
|
Region A: Residues: [1-70] |
1 11 21 31 41 51
| | | | | |
1 MAGNANSVDE EVTRILGGIY LGGIRPIIDH RPLGAEFNIT HILSVIKFQV IPEYLIRKGY 60
61 TLKNIPIDDD
|
| Detection Method: |  |
| Confidence: | 152.980454 |
| Match: | 1mkp__ |
| Description: | Mapk phosphatase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [71-250] |
1 11 21 31 41 51
| | | | | |
1 DVTDVLQYFD ETNRFIDQCL FPNEVEYSPR LVDFKKKPQR GAVFAHCQAG LSRSVTFIVA 60
61 YLMYRYGLSL SMAMHAVKRK KPSVEPNENF MEQLHLFEKM GGDFVDFDNP AYKQWKLKQS 120
121 IKLDPSGSEL VSNSGMFKDS ESSQDLDKLT EAEKSKVTAV RCKKCRTKLA LSTSFIAHDP 180
181
|
| Detection Method: | |
| Confidence: | 17.0 |
| Match: | 1larA_ |
| Description: | RPTP Lar |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [251-364] |
1 11 21 31 41 51
| | | | | |
1 PSKESSEGHF IKRAANSHRI IDIQESQANC SHFFIEPLKW MQPELQGKQE LEGKFSCPGC 60
61 SSKVGGYNWK GSRCSCGKWV IPAIHLQTSK VDQFPLQSTA LPNMVNFESE KVNR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.359 | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.340 | c.30.1 | PreATP-grasp domain |
| View | Download | 0.340 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.365 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.294 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.292 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.282 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.231 | d.237.1 | Hypothetical protein YjiA, C-terminal domain |
| View | Download | 0.220 | d.185.1 | LuxS/MPP-like metallohydrolase |
| View | Download | 0.211 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.206 | a.3.1 | Cytochrome c |
