| Protein: | AIM21 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 679 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AIM21.
| Description | E-value | Query Range |
Subject Range |
|
|
7.0E-56 | [2..589] | [782..1366] |
|
|
2.0E-54 | [3..584] | [496..1087] |
|
|
4.0E-54 | [3..581] | [492..1069] |
|
|
1.0E-52 | [3..581] | [263..828] |
|
|
2.0E-50 | [228..664] | [535..996] |
|
Region A: Residues: [1-17] |
1 11 21 31 41 51
| | | | | |
1 MPSEVTPKVP ERPSRRK
|
|
Region B: Residues: [242-320] |
1 11 21 31 41 51
| | | | | |
1 ESDDKAEKFT KHPESSLEEL QKHQEQQEEK IFQNPTDEES TTSLNEKQEG KDNMEVNSQP 60
61 QGPSDTETVI AATSSNVPS
|
| Detection Method: |  |
| Confidence: | 13.0 |
| Match: | 1l8mA |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [18-90] |
1 11 21 31 41 51
| | | | | |
1 TSELFPLSGS ESGDIKANSE PPTPAGTPNV PTRRPILKAK TMTSFESGMD QESLPKVPLQ 60
61 RPVRRSTTEE LNN
|
| Detection Method: | |
| Confidence: | 13.0 |
| Match: | 1l8mA |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [91-169] |
1 11 21 31 41 51
| | | | | |
1 VMNNTSKELE EIESLISKHN IHNVSRKKSP TSVEEGKVAA IHQNGQRSAS DNKTSTNPSP 60
61 LEKNEHEGAE GNESAISPS
|
| Detection Method: | |
| Confidence: | 13.0 |
| Match: | 1l8mA |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [170-241] |
1 11 21 31 41 51
| | | | | |
1 NLVNKSNNEV TEHSDSEDLT EKQKVHAALD NEAGDRSHFE EKLIPGDMKV QVDVSKDVEE 60
61 GSLNALPPSG IT
|
| Detection Method: | |
| Confidence: | 13.0 |
| Match: | 1l8mA |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [321-503] |
1 11 21 31 41 51
| | | | | |
1 QIASEEENDV PVIPRSRPKK DFEAHVQKEE LPNTQEKRVS EECDSTLIST EEESKIPKIP 60
61 SERPKRRAPP PVPKKPSSRI AAFQEMLQKQ QQQDLHNNGN SSATTASADI AKKHTDSSIT 120
121 SDTTKADFTS KLNGLFALPG MVNPGQLPPS LEKKLSSPDT ESKLGPQDQS QAKTGPLGGT 180
181 RRG
|
| Detection Method: | |
| Confidence: | 7.9 |
| Match: | 1jhnA |
| Description: | Calnexin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [504-591] |
1 11 21 31 41 51
| | | | | |
1 RGPRGRKLPS KVASVEKIEE DDNTNKIEIF NNWNVSSSFS KEKVLIDTTP GEQAERALDE 60
61 KSKSIPEEQR EQSPNKMEAA LCPFELDE
|
| Detection Method: | |
| Confidence: | 13.75 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [592-679] |
1 11 21 31 41 51
| | | | | |
1 KEKLPANAES DPLSQLPQTN AVGNRKAISE ESLSPSEAIA NRDQNDTTEI QEQQMEDQME 60
61 VDMERELSGG YEDVDSALHS EEASFHSL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.306 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.335 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.429 | a.4.12 | TrpR-like |
| View | Download | 0.285 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.424 | a.46.1 | Methionine synthase domain |
| View | Download | 0.277 | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.250 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.244 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.237 | a.77.1 | DEATH domain |
| View | Download | 0.206 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.202 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
