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View Structure Prediction Details

Protein: SUC2
Organism: Saccharomyces cerevisiae
Length: 532 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SUC2.

Description E-value Query
Range
Subject
Range
INVA_VIGRR - Acid beta-fructofuranosidase OS=Vigna radiata var. radiata GN=INVA PE=1 SV=1
gi|384325, gi|218326 - gi|384325|prf||1905412A acid invertase, gi|218326|dbj|BAA01107.1| invertase [Vigna radiata]
0.0 [12..531] [100..633]
INVB_DAUCA - Beta-fructofuranosidase, soluble isoenzyme I OS=Daucus carota GN=INV*DC4 PE=1 SV=2
0.0 [8..531] [111..648]
gi|18146714 - gi|18146714|dbj|BAB82419.1| acid invertase [Citrus unshiu]
0.0 [14..531] [105..636]
INVA_SOLLC - Acid beta-fructofuranosidase OS=Solanum lycopersicum GN=TIV1 PE=2 SV=1
gi|421930, gi|22... - gi|421930|pir||S31157 beta-fructofuranosidase (EC 3.2.1.26) precursor - currant tomato, gi|22723|emb...
0.0 [12..531] [88..623]
gi|861159 - gi|861159|emb|CAA89992.1| vacuolar invertase; beta-fructofuranosidase [Vicia faba var. minor]
INVA_VICFA - Acid beta-fructofuranosidase OS=Vicia faba GN=VCINV PE=2 SV=1
0.0 [7..531] [83..625]
gi|14699987 - gi|14699987|gb|AAK71504.1| soluble acid invertase FRUCT2 [Ipomoea batatas]
0.0 [11..531] [107..644]
gi|1839579 - gi|1839579|gb|AAB47172.1| vacuolar invertase 2, GIN2 [Vitis vinifera=grape berries, Sultana, berries...
0.0 [9..532] [114..651]
gi|33359653 - gi|33359653|gb|AAQ17074.1| acid invertase [Solanum tuberosum]
0.0 [12..531] [91..626]
gi|21464543 - gi|21464543|gb|AAM52062.1| vacuolar acid invertase PsI-1 [Pisum sativum]
0.0 [12..529] [96..627]

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Predicted Domain #1
Region A:
Residues: [1-532]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLQAFLFLL AGFAAKISAS MTNETSDRPL VHFTPNKGWM NDPNGLWYDE KDAKWHLYFQ  60
   61 YNPNDTVWGT PLFWGHATSD DLTNWEDQPI AIAPKRNDSG AFSGSMVVDY NNTSGFFNDT 120
  121 IDPRQRCVAI WTYNTPESEE QYISYSLDGG YTFTEYQKNP VLAANSTQFR DPKVFWYEPS 180
  181 QKWIMTAAKS QDYKIEIYSS DDLKSWKLES AFANEGFLGY QYECPGLIEV PTEQDPSKSY 240
  241 WVMFISINPG APAGGSFNQY FVGSFNGTHF EAFDNQSRVV DFGKDYYALQ TFFNTDPTYG 300
  301 SALGIAWASN WEYSAFVPTN PWRSSMSLVR KFSLNTEYQA NPETELINLK AEPILNISNA 360
  361 GPWSRFATNT TLTKANSYNV DLSNSTGTLE FELVYAVNTT QTISKSVFAD LSLWFKGLED 420
  421 PEEYLRMGFE VSASSFFLDR GNSKVKFVKE NPYFTNRMSV NNQPFKSEND LSYYKVYGLL 480
  481 DQNILELYFN DGDVVSTNTY FMTTGNALGS VNMTTGVDNL FYIDKFQVRE VK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 85.154902
Match: 1uypA_
Description: The three-dimensional structure of beta-fructosidase (invertase) from Thermotoga maritima
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
beta-fructofuranosidase activity 7.66330112409449 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 4.84901331389046 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 4.12404022449559 bayes_pls_golite062009
hydrolase activity 2.77015860151809 bayes_pls_golite062009
carbohydrate binding 1.95748400706644 bayes_pls_golite062009
binding 1.30052601179082 bayes_pls_golite062009
sugar binding 1.05545473249163 bayes_pls_golite062009
catalytic activity 0.925574609957366 bayes_pls_golite062009
protein binding 0.0138714145421778 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle