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View Structure Prediction Details

Protein: ATG32
Organism: Saccharomyces cerevisiae
Length: 529 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATG32.

Description E-value Query
Range
Subject
Range
gi|49526389 - gi|49526389|emb|CAG60013.1| unnamed protein product [Candida glabrata]
ATG32_CANGA - Autophagy-related protein 32 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 ...
207.0 [0..24] [412..12]
ATG32_ASHGO - Autophagy-related protein 32 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y...
gi|44984830, gi|... - gi|45198801|ref|NP_985830.1| AFR283Wp [Ashbya gossypii ATCC 10895], gi|44984830|gb|AAS53654.1| AFR28...
157.0 [0..14] [435..2]
gi|49640158 - gi|49640158|emb|CAH02615.1| KLLA0A00660p [Kluyveromyces lactis]
ATG32_KLULA - Autophagy-related protein 32 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC...
132.0 [0..41] [458..41]

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Predicted Domain #1
Region A:
Residues: [1-361]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLEYQQREG KGSSSKSMPP DSSSTTIHTC SEAQTGEDKG LLDPHLSVLE LLSKTGHSPS  60
   61 PMGQNLVTSI DISGNHNVND SISGSWQAIQ PLDLGASFIP ERCSSQTTNG SILSSSDTSE 120
  121 EEQELLQAPA ADIINIIKQG QEGANVVSPS HPFKQLQKII SLPLPGKEKT PFNEQDDDGD 180
  181 EDEAFEEDSV TITKSLTSST NSFVMPKLSL TQKNPVFRLL ILGRTGSSFY QSIPKEYQSL 240
  241 FELPKYHDSA TFPQYTGIVI IFQELREMVS LLNRIVQYSQ GKPVIPICQP GQVIQVKNVL 300
  301 KSFLRNKLVK LLFPPVVVTN KRDLKKMFQR LQDLSLEYGE DVNEEDNDDE AIHTKSRSYC 360
  361 R

[Run NCBI BLAST on this sequence.]

Detection Method: ab initio
Confidence: 8.65
Match:
Description: No description for 1llwA was found.

Predicted Domain #2
Region A:
Residues: [362-529]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NKKAENSKKK SPKSNKKPKR KKQKFFTSWF TWGISITIGI SFGCCVTYFV TAAYEHQTVK  60
   61 SLSLRPSILA SLLSLDSSSD TINTPATASP SSTEQFLWFD KGTLQINFHS DGFIMKSLTI 120
  121 IKETWGKMNT FVLHALSKPL KFLENLNKSS EFSIDESNRI LALGYILL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle