YRC Public Data Repository - Protein Structure Prediction

Protein:	MOB1
Organism:	Saccharomyces cerevisiae
Length:	314 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MOB1.

Description	E-value	Query Range	Subject Range
MOB1_YEAST - DBF2 kinase activator protein MOB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MOB1 ... MOB1 - Component of the mitotic exit network; associates with and is required for the activation and Cdc15p...	0.0	[1..314]	[1..314]
gi\|2832633, gi\|7... - pir\|\|T04426 hypothetical protein T18B16.20 - Arabidopsis thaliana, gi\|7268700\|emb\|CAB78907.1\| putat...	7.0E-95	[99..309]	[1189..1399]
MOL1B_PONPY - Mps one binder kinase activator-like 1B - Pongo pygmaeus (Orangutan) gi\|55606148 - gi\|55606148\|ref\|XP_515735.1\| PREDICTED: Mob4B protein isoform 4 [Pan troglodytes] tr\|G1SUR2\|G1SUR2... - Uncharacterized protein OS=Oryctolagus cuniculus GN=MOB1A PE=4 SV=2 MOB1A_MOUSE - MOB kinase activator 1A OS=Mus musculus GN=Mob1a PE=2 SV=3 MOBKL1B - MOB1, Mps One Binder kinase activator-like 1B (yeast) MOB1A_PONAB - MOB kinase activator 1A OS=Pongo abelii GN=MOB1A PE=2 SV=3 MOB1A_RAT - MOB kinase activator 1A OS=Rattus norvegicus GN=Mob1a PE=2 SV=3 gi\|111305145, gi... - gi\|76628940\|ref\|XP_871266.1\| PREDICTED: similar to Mob4B protein [Bos taurus], gi\|115496426\|ref\|NP_0... gi\|73980517 - gi\|73980517\|ref\|XP_852858.1\| PREDICTED: similar to Mob4B protein isoform 1 [Canis familiaris]	8.0E-93	[102..311]	[3..211]
MOB1A_MEDSF - MOB kinase activator-like 1A OS=Medicago sativa subsp. falcata GN=MOB1-A PE=2 SV=2	2.0E-90	[102..309]	[4..210]
MOB3B_MOUSE - MOB kinase activator 3B OS=Mus musculus GN=Mob3b PE=2 SV=1	8.0E-87	[110..311]	[13..214]

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Predicted Domain #1

Region A:
Residues: [1-91]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFLQNFHIS PGQTIRSTRG FKWNTANAAN NAGSVSPTKA TPHNNTINGN NNNANTINNR  60
   61 ADFTNNPVNG YNESDHGRMS PVLTTPKRHA P

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [92-314]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPEQLQNVTD FNYTPSHQKP FLQPQAGTTV TTHQDIKQIV EMTLGSEGVL NQAVKLPRGE  60
   61 DENEWLAVHC VDFYNQINML YGSITEFCSP QTCPRMIATN EYEYLWAFQK GQPPVSVSAP 120
  121 KYVECLMRWC QDQFDDESLF PSKVTGTFPE GFIQRVIQPI LRRLFRVYAH IYCHHFNEIL 180
  181 ELNLQTVLNT SFRHFCLFAQ EFELLRPADF GPLLELVMEL RDR

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	119.107905
Match:	PF03637
Description:	Mob1/phocein family

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits