Protein: | SHQ1 |
Organism: | Saccharomyces cerevisiae |
Length: | 507 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SHQ1.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..507] | [1..507] |
|
0.0 | [1..482] | [1..447] |
|
0.0 | [1..469] | [205..639] |
|
5.0E-89 | [157..507] | [192..496] |
|
1.0E-64 | [259..458] | [6..184] |
Region A: Residues: [1-273] |
1 11 21 31 41 51 | | | | | | 1 MITPRFSITQ DEEFIFLKIF ISNIRFSAVG LEIIIQENMI IFHLSPYYLR LRFPHELIDD 60 61 ERSTAQYDSK DECINVKVAK LNKNEYFEDL DLPTKLLARQ GDLAGADALT ENTDAKKTQK 120 121 PLIQEVETDG VSNNIKDDVK TIGQMGEGFN WEIEQKMDSS TNNGILKTKY GFDNLYDTVI 180 181 SVSTSNGNDI NELDDPEHTD ANDRVIERLR KENLKFDPEY YVSEYMTHKY GNEEDLEING 240 241 IKELLKFTPS IVKQYLQWYK DSTNPNLVMP IEF |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [274-507] |
1 11 21 31 41 51 | | | | | | 1 TDEEQKQMQD NLPKKSYLVE DIKPLYVTIL SVLFSYVFEQ IENEGTHTTE SAWTMGKLCP 60 61 QISFLDQQLK QVNELQDGMK EISKVNKDSS LIKIAIITGI RRALSYPLHR NYDLAMKAWT 120 121 FVYYILRGGK RLVIRALLDI HETFRFHDVY YVYDKVLLDD LTAWFISQGS ENVIRSLALE 180 181 MRKEQESLSK QDIEFECIAS FNEQTGEPEW ETLNIREMEI LAESEYREQQ QNPQ |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [360-507] |
1 11 21 31 41 51 | | | | | | 1 KDSSLIKIAI ITGIRRALSY PLHRNYDLAM KAWTFVYYIL RGGKRLVIRA LLDIHETFRF 60 61 HDVYYVYDKV LLDDLTAWFI SQGSENVIRS LALEMRKEQE SLSKQDIEFE CIASFNEQTG 120 121 EPEWETLNIR EMEILAESEY REQQQNPQ |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.