| Protein: | DPH1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 425 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DPH1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..425] | [1..425] |
|
|
0.0 | [8..415] | [6..413] |
|
|
0.0 | [43..415] | [25..392] |
|
|
0.0 | [46..415] | [2..369] |
|
|
0.0 | [39..415] | [29..403] |
|
|
0.0 | [39..402] | [26..391] |
|
|
0.0 | [59..416] | [70..409] |
|
Region A: Residues: [1-162] |
1 11 21 31 41 51
| | | | | |
1 MSGSTESKKQ PRRRFIGRKS GNSNNDKLTT VAENGNEIIH KQKSRIALGR SVNHVPEDIL 60
61 NDKELNEAIK LLPSNYNFEI HKTVWNIRKY NAKRIALQMP EGLLIYSLII SDILEQFCGV 120
121 ETLVMGDVSY GACCIDDFTA RALDCDFIVH YAHSCLVPID VT
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.378 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.417 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.418 | c.23.4 | Succinyl-CoA synthetase domains |
| View | Download | 0.361 | c.23.6 | Cobalamin (vitamin B12)-binding domain |
| View | Download | 0.348 | c.23.4 | Succinyl-CoA synthetase domains |
| View | Download | 0.338 | c.23.4 | Succinyl-CoA synthetase domains |
| View | Download | 0.333 | c.23.6 | Cobalamin (vitamin B12)-binding domain |
| View | Download | 0.307 | c.32.1 | Tubulin/Dihydroxyacetone kinase nucleotide-binding domain |
| View | Download | 0.301 | c.23.1 | CheY-like |
| View | Download | 0.299 | c.32.1 | Tubulin/Dihydroxyacetone kinase nucleotide-binding domain |
| View | Download | 0.293 | c.1.10 | Aldolase |
| View | Download | 0.290 | c.23.4 | Succinyl-CoA synthetase domains |
| View | Download | 0.281 | c.23.6 | Cobalamin (vitamin B12)-binding domain |
| View | Download | 0.237 | c.61.1 | PRTase-like |
| View | Download | 0.236 | c.1.2 | Ribulose-phoshate binding barrel |
| View | Download | 0.233 | c.1.2 | Ribulose-phoshate binding barrel |
| View | Download | 0.230 | c.78.2 | Aspartate/glutamate racemase |
| View | Download | 0.228 | c.23.1 | CheY-like |
| View | Download | 0.225 | c.1.10 | Aldolase |
| View | Download | 0.223 | c.1.2 | Ribulose-phoshate binding barrel |
| View | Download | 0.222 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.216 | c.23.4 | Succinyl-CoA synthetase domains |
| View | Download | 0.212 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
|
Region A: Residues: [163-226] |
1 11 21 31 41 51
| | | | | |
1 KIKVLYVFVT INIQEDHIIK TLQKNFPKGS RIATFGTIQF NPAVHSVRDK LLNDEEHMLY 60
61 IIPP
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|
Region B: Residues: [282-425] |
1 11 21 31 41 51
| | | | | |
1 RKFTREGYDQ KQLVEVRAEA IEVARKGKVF GLILGALGRQ GNLNTVKNLE KNLIAAGKTV 60
61 VKIILSEVFP QKLAMFDQID VFVQVACPRL SIDWGYAFNK PLLTPYEASV LLKKDVMFSE 120
121 KYYPMDYYEA KGYGRGETPK HAIE
|
| Detection Method: | |
| Confidence: | 7.04 |
| Match: | 1jzxK |
| Description: | 50S subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [227-281] |
1 11 21 31 41 51
| | | | | |
1 QIKPLSRGEV LGCTSERLDK EQYDAMVFIG DGRFHLESAM IHNPEIPAFK YDPYN
|
| Detection Method: | |
| Confidence: | 7.04 |
| Match: | 1jzxK |
| Description: | 50S subunit |
| Matching Structure (courtesy of the PDB): |
|
