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View Structure Prediction Details

Protein: YIL096C
Organism: Saccharomyces cerevisiae
Length: 336 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YIL096C.

Description E-value Query
Range
Subject
Range
YIL096C - Putative protein of unknown function; associates with precursors of the 60S ribosomal subunit; predi...
gi|151943071 - gi|151943071|gb|EDN61406.1| conserved protein [Saccharomyces cerevisiae YJM789]
BMT5_YEAST - 25S rRNA (uridine(2634)-N(3))-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S2...
0.0 [1..336] [1..336]
gi|8778331 - gi|8778331|gb|AAF79340.1|AC002304_33 F14J16.3 [Arabidopsis thaliana]
2.0E-85 [12..297] [496..747]
BMT5_SCHPO - 25S rRNA (uridine-N(3))-methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=...
SPCC1919.13c - conserved eukaryotic protein
3.0E-69 [34..334] [8..273]
gi|13544003 - gi|13544003|gb|AAH06136.1| FDXACB1 protein [Homo sapiens]
9.0E-50 [73..314] [6..196]

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Predicted Domain #1
Region A:
Residues: [1-63]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARKLKGKIG SKGLKGALLR HKAKVKLVRN IESKQKHELR KKNSSANNKT VKRNQEFQKL  60
   61 NQG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.466 a.3.1 Cytochrome c
View Download 0.571 a.17.1 p8-MTCP1
View Download 0.393 a.4.9 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
View Download 0.559 a.112.1 Description not found.
View Download 0.457 d.47.1 Ribosomal protein L11, N-terminal domain
View Download 0.386 a.180.1 N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
View Download 0.342 a.74.1 Cyclin-like
View Download 0.301 a.60.6 DNA polymerase beta, N-terminal domain-like
View Download 0.247 d.45.1 ClpS-like
View Download 0.241 a.101.1 Uteroglobin-like
View Download 0.239 a.44.1 Disulphide-bond formation facilitator (DSBA), insertion domain
View Download 0.236 a.64.1 Saposin
View Download 0.223 a.46.2 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
View Download 0.216 d.43.1 Elongation factor Ts (EF-Ts), dimerisation domain

Predicted Domain #2
Region A:
Residues: [64-336]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KVMPFEKDET LMLCGEGDFS FARSIVEQNY IESDNLIITS YDNSVNELKL KYPHTFEENY  60
   61 QYLKDLNIPI FFQIDVTKLV KSFKISKNNT WFKIINRLSD HRWGNKPLQN IVFNFPHNGK 120
  121 GIKDQERNIR EHQDLIFNFF QNSLQLFNLI NTKIQNDTLR YTQGYDLNED TPQAKKLTAE 180
  181 GYGNIILSLF DGEPYDSWQI KLLAKKNGLT LSRSSKFQWE NFPGYHHRRT NSEQDTTKPA 240
  241 KERDARFYIF SKYVSNSSKH NRKSKKDTDS DSD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle