| Protein: | MET30 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 640 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MET30.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..640] | [1..640] |
|
|
0.0 | [109..640] | [901..1443] |
|
|
0.0 | [213..639] | [833..1251] |
|
Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MRRERQRMMS FEDKDKDDLD NSNSNNSSEM TDTAMMPPLK RLLITGSSDD LAQGSSGKKK 60
61 MTMATRSPSS SPDLATNDSG TRVQPLPEYN FTKFCYRHNP DIQ
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.324 | d.15.1 | Ubiquitin-like |
| View | Download | 0.337 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.370 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.337 | d.233.1 | Inhibitor of vertebrate lysozyme, Ivy |
| View | Download | 0.477 | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.477 | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.370 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.337 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.337 | d.233.1 | Inhibitor of vertebrate lysozyme, Ivy |
| View | Download | 0.324 | d.15.1 | Ubiquitin-like |
| View | Download | 0.304 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.293 | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.259 | b.60.1 | Lipocalins |
| View | Download | 0.239 | a.150.1 | Anti-sigma factor AsiA |
| View | Download | 0.239 | d.228.1 | Replication modulator SeqA, C-terminal DNA-binding domain |
| View | Download | 0.219 | d.58.49 | YajQ-like |
| View | Download | 0.209 | b.60.1 | Lipocalins |
|
Region A: Residues: [104-493] |
1 11 21 31 41 51
| | | | | |
1 FSPTHTACYK QDLKRTQEIN ANIAKLPLQE QSDIHHIISK YSNSNDKIRK LILDGILSTS 60
61 CFPQLSYISS LVTHMIKIDF ISILPQELSL KILSYLDCQS LCNATRVCRK WQKLADDDRV 120
121 WYHMCEQHID RKCPNCGWGL PLLHMKRARI QQNSTGSSSN ADIQTQTTRP WKVIYRERFK 180
181 VESNWRKGHC RIQEFKGHMD GVLTLQFNYR LLFTGSYDST IGIWDLFTGK LIRRLSGHSD 240
241 GVKTLYFDDR KLITGSLDKT IRVWNYITGE CISTYRGHSD SVLSVDSYQK VIVSGSADKT 300
301 VKVWHVESRT CYTLRGHTEW VNCVKLHPKS FSCFSCSDDT TIRMWDIRTN SCLKVFRGHV 360
361 GQVQKIIPLT IKDVENLATD NTSDGSSPQD
|
| Detection Method: | |
| Confidence: | 189.66807 |
| Match: | 1erjA_ |
| Description: | Tup1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [494-640] |
1 11 21 31 41 51
| | | | | |
1 DPTMTDGADE SDTPSNEQET VLDENIPYPT HLLSCGLDNT IKLWDVKTGK CIRTQFGHVE 60
61 GVWDIAADNF RIISGSHDGS IKVWDLQSGK CMHTFNGRRL QRETQHTQTQ SLGDKVAPIA 120
121 CVCIGDSECF SGDEFGCVKM YKFDLND
|
| Detection Method: | |
| Confidence: | 85.9897 |
| Match: | 1gxrA_ |
| Description: | Groucho/tle1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
