| Protein: | PRM2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 656 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PRM2.
| Description | E-value | Query Range |
Subject Range |
|
|
50.0 | [0..6] | [502..4] |
|
Region A: Residues: [1-99] |
1 11 21 31 41 51
| | | | | |
1 MNNVHIIKPL SLPQRFFSCI FHPLLLIFFT SVILTIWGSF SVIDITMAKM SHAQVKRNDT 60
61 VSTFASISTA TATATTTATT TATMTAVTTQ HAIYSANSY
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.760 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.760 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.748 | a.24.4 | Hemerythrin |
| View | Download | 0.689 | b.61.5 | Dipeptidyl peptidase I (cathepsin C), exclusion domain |
| View | Download | 0.672 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.628 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.628 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.620 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.605 | c.51.1 | Anticodon-binding domain of Class II aaRS |
|
Region A: Residues: [100-580] |
1 11 21 31 41 51
| | | | | |
1 SLNKTFIDNT IDQYFESKLR SIESTVGTDM QEKFKSYTDD ILDNKQKLIN DQISLETELI 60
61 KEVLEVNNTI FNELLTKSQL INDTWNEISE DAMTIDKDSI SQMASNLLLN YSMFDSIFGN 120
121 YSRKLKSLQN FNGTITDFST QLDTSSTLSL NFLRNSTDWL QLKRNFTANL QNEISILSGG 180
181 STEVTSSTSI IKRSLKTNSE ENSVLSAVKN HVFRKCKRMT IIFTVMYFAF VILLMAIERI 240
241 LFQLENQQVN LVMSQINGLT GQTNFTKYNK VLKSLITTLN LSTLYPIPYQ LTKLINQKIF 300
301 KREPEKIDDK KVKKSKLFYC NWWIISNGAH LWLFGFLMLL IHWQIVTRLT NFEVPSLPTF 360
361 HKRAGPSLYK REVWTDGNIT TTIEGFINDS VSLLCENFQM EVNEKFITAN LSLQTDPNLK 420
421 VQSTDILNLW VNDTNTQFEK YLNESSQNWQ GIDLQVEPLL GSDSINEFLG QYFLPTYEVT 480
481 N
|
| Detection Method: | |
| Confidence: | 7.31 |
| Match: | |
| Description: | No description for 1l9uD was found. |
|
Region A: Residues: [581-656] |
1 11 21 31 41 51
| | | | | |
1 TNSSFALDIQ KYGIINRGIN ITNASVAALS SLSKRQIKDK EQKQTYFLHT VYKWGLLAVC 60
61 LTILFHHMLI FIILKL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.790 | a.239.1 | Description not found. |
| View | Download | 0.732 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.623 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.593 | a.204.1 | Description not found. |
| View | Download | 0.518 | a.2.7 | tRNA-binding arm |
| View | Download | 0.518 | a.2.7 | tRNA-binding arm |
| View | Download | 0.411 | a.64.1 | Saposin |
| View | Download | 0.411 | a.64.1 | Saposin |
| View | Download | 0.396 | a.64.1 | Saposin |
