YRC Public Data Repository - Protein Structure Prediction

Protein:	MDM31
Organism:	Saccharomyces cerevisiae
Length:	579 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MDM31.

Description	E-value	Query Range	Subject Range
gi\|151944138 - gi\|151944138\|gb\|EDN62431.1\| mitochondrial distribution and morphology [Saccharomyces cerevisiae YJM7... MDM31_YEAST - Mitochondrial distribution and morphology protein 31 OS=Saccharomyces cerevisiae (strain ATCC 204508... MDM31 - Mitochondrial inner membrane protein with similarity to Mdm32p, required for normal mitochondrial mo... gi\|207344496 - gi\|207344496\|gb\|EDZ71620.1\| YHR194Wp-like protein [Saccharomyces cerevisiae AWRI1631]	0.0	[1..579]	[1..579]
gi\|238879227 - gi\|238879227\|gb\|EEQ42865.1\| mitochondrial distribution and morphology protein 31 [Candida albicans W... gi\|3859697, gi\|2... - gi\|3859697\|emb\|CAA21972.1\| unknown possible membrane protein [Candida albicans], pir\|\|T52152 probabl...	0.0	[40..579]	[44..595]
mdm31 - mitochondrial inner membrane protein Mdm31 MDM31_SCHPO - Mitochondrial distribution and morphology protein 31 OS=Schizosaccharomyces pombe (strain 972 / ATCC...	0.0	[92..579]	[116..591]

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Predicted Domain #1

Region A:
Residues: [1-579]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLFTRPFLR SPRQFSVARY VYWARSPALR SNLRIPSIAA ASLRAYSNES KTGRDAPPDK  60
   61 KSKKLSNLKY ITERDSLLVQ TNNIFTKLKI NIRWFLKKST RPFNSDDISA FISWILVSNI 120
  121 FIFIFWTTTF VSLILYLINT VFAQEYLASK IGKFITKNES LSIVFESAIV PDWSSGKISF 180
  181 QKVFVSRRPK VSRGFTKGSQ QDALQRAKLA LSERILVNQQ DFDNGNYTQF DLTIDQVDIS 240
  241 LNFRKWINGK GILDEVTING LRGVIDRTHV VWKKDDDPKN YLNVYQPGDF EISKFTMNDV 300
  301 LCTLYQPNGF RPFQVSIFNC DLPQLRKHWL FYDILNANNI NGTYDNSMFT IHKKFRTDDQ 360
  361 HQDPTLLWKQ MTRFRVDNLD IDHLNAGIEG PFGWINEGRV NMIGDVLLPD DDAASDSLQL 420
  421 TEILTEIGDR LIKKAKRYTS SLPLVGPGFS PAVDEIDPND YFIMDFSLRL YNVKAEVPLF 480
  481 TSGLTYINSA LIRPIVGYIN SHRTYIPIKC RIVKKKSDFE GSWTIYDSYL MRDLSAEAYD 540
  541 AFADYVADDE KRTLRLRRVG FWSLQLILQV ILMSLGAIA

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits