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View Structure Prediction Details

Protein: PFS1
Organism: Saccharomyces cerevisiae
Length: 237 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PFS1.

Description E-value Query
Range
Subject
Range
PFS1 - Sporulation protein required for prospore membrane formation at selected spindle poles, ensures func...
ADY1_YEAST - Prospore formation at selected spindle poles protein 1 OS=Saccharomyces cerevisiae (strain ATCC 2045...
gi|151944129 - gi|151944129|gb|EDN62422.1| sporulation protein [Saccharomyces cerevisiae YJM789]
gi|207344516 - gi|207344516|gb|EDZ71636.1| YHR185Cp-like protein [Saccharomyces cerevisiae AWRI1631]
0.0 [1..237] [1..237]

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Predicted Domain #1
Region A:
Residues: [1-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQGYTQLSA PELKETKTSK LNKMNNFRSS PIAEIINKIP PDCGKIQNTT FPEFNPALRR  60
   61 RQHEQWPAYE KPIRVTDSMS PQLSSINCLP NLYPHGTLPL PNPYLSYLNH IEKVNCQDVK 120
  121 FSNWSVLHNS NNGFEIPTYF SPRTTQNMPC SEKVESWLER LPIFVGFDGY LFTNCFDYEY 180
  181 MLDWEETEFT FEKTSCMETD YSKALTDTDI IYIQEKKIEA LIRNQYLKEY EFSQKDF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [132-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NGFEIPTYFS PRTTQNMPCS EKVESWLERL PIFVGFDGYL FTNCFDYEYM LDWEETEFTF  60
   61 EKTSCMETDY SKALTDTDII YIQEKKIEAL IRNQYLKEYE FSQKDF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle