Protein: | DBP8 |
Organism: | Saccharomyces cerevisiae |
Length: | 431 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DBP8.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..417] | [180..597] |
|
0.0 | [1..419] | [275..694] |
|
0.0 | [1..393] | [179..580] |
|
0.0 | [1..416] | [178..602] |
|
0.0 | [1..412] | [206..618] |
Region A: Residues: [1-222] |
1 11 21 31 41 51 | | | | | | 1 MADFKSLGLS KWLTESLRAM KITQPTAIQK ACIPKILEGR DCIGGAKTGS GKTIAFAGPM 60 61 LTKWSEDPSG MFGVVLTPTR ELAMQIAEQF TALGSSMNIR VSVIVGGESI VQQALDLQRK 120 121 PHFIIATPGR LAHHIMSSGD DTVGGLMRAK YLVLDEADIL LTSTFADHLA TCISALPPKD 180 181 KRQTLLFTAT ITDQVKSLQN APVQKGKPPL FAYQVESVDN VA |
Detection Method: | |
Confidence: | 577.228787 |
Match: | 1hv8A_ |
Description: | Putative DEAD box RNA helicase |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [223-431] |
1 11 21 31 41 51 | | | | | | 1 IPSTLKIEYI LVPEHVKEAY LYQLLTCEEY ENKTAIIFVN RTMTAEILRR TLKQLEVRVA 60 61 SLHSQMPQQE RTNSLHRFRA NAARILIATD VASRGLDIPT VELVVNYDIP SDPDVFIHRS 120 121 GRTARAGRIG DAISFVTQRD VSRIQAIEDR INKKMTETNK VHDTAVIRKA LTKVTKAKRE 180 181 SLMAMQKENF GERKRQQKKK QNDGKSLRS |
Detection Method: | |
Confidence: | 577.228787 |
Match: | 1hv8A_ |
Description: | Putative DEAD box RNA helicase |
Matching Structure (courtesy of the PDB): |