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View Structure Prediction Details

Protein: SPO16
Organism: Saccharomyces cerevisiae
Length: 198 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPO16.

Description E-value Query
Range
Subject
Range
SPO16 - Meiosis-specific protein involved in synaptonemal complex assembly; implicated in regulation of cros...
SPO16_YEAST - Sporulation-specific protein 16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPO16 PE...
0.0 [1..198] [1..198]

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Predicted Domain #1
Region A:
Residues: [1-198]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEFFWDVQK IQEISNVEEH SVVKCVTVNT SRLISQLNEE LQDEESGVNF IVTQLQLLIN  60
   61 NVYEKIQKSP GVPAHRSLMI NLNFTRLKFS IAYWDILLER SLDLINGPSK TGARYFITEV 120
  121 TPVDRSRYVE NNQYFLAFKA NQRLTRNSVD MDEFIDFEIL IKQIIFDLFK KNGIPDQDFE 180
  181 AILSRFHNLE SLVVAFNE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle