YRC Public Data Repository - Protein Structure Prediction

Protein:	YHR138C
Organism:	Saccharomyces cerevisiae
Length:	114 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YHR138C.

Description	E-value	Query Range	Subject Range
gi\|190405916 - gi\|190405916\|gb\|EDV09183.1\| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] YHT8_YEAST - Uncharacterized protein YHR138C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHR138C ... gi\|151944084 - gi\|151944084\|gb\|EDN62377.1\| conserved protein [Saccharomyces cerevisiae YJM789] YHR138C - Putative protein of unknown function; has similarity to Pbi2p; double null mutant lacking Pbi2p and ...	1.0E-52	[1..114]	[1..114]
YBG3_NEUCR - Uncharacterized protein B24G3.190 OS=Neurospora crassa GN=B24G3.190 PE=3 SV=1 YBG3_NEUCR - Uncharacterized protein B24G3.190 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 ...	9.0E-20	[1..68]	[1..64]
gi\|447739 - gi\|447739\|prf\|\|1915304A nylB upstream ORF	0.005	[25..105]	[4..72]

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Predicted Domain #1

Region A:
Residues: [1-114]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKASYLVLIF ISIFSMAQAS SLSSYIVTFP KTDNMATDQN SIIEDVKKYV VDIGGKITHE  60
   61 YSLIKGFTVD LPDSDQILDG LKERLSYIES EYGAKCNLEK DSEVHALNRD HLVA

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits