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View Structure Prediction Details

Protein: SPL2
Organism: Saccharomyces cerevisiae
Length: 148 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPL2.

Description E-value Query
Range
Subject
Range
gi|190405914 - gi|190405914|gb|EDV09181.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
gi|2231067 - gi|2231067|emb|CAA73949.1| hypothetical protein [Saccharomyces cerevisiae]
293.0 [0..1] [148..1]

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Predicted Domain #1
Region A:
Residues: [1-148]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTYTPLIYN IYNVHIWVFT ESQGQIGQMS PRGKMETAVS QGQHKQLKDG HQHKGRKLSE  60
   61 EIASLLRLKE CRRLNPASYY TPRRTSQSQS LSGSTFKEYN EYINEKDSSR AQRQNAAAVL 120
  121 SKLAHDFWEN DCVIDEDIFE DSSDEEQS

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Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.287 a.111.1 Acid phosphatase/Vanadium-dependent haloperoxidase


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle